G198532


Basic Information

Item Value
gene id G198532
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 4358799 ~ 4359095 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU225338
GTGACATTTACAAAAATTCTATGCAGTGTACGGAACTGAACTGAACAACTATTTGACGTGTTTAATTATGTATTTGCCATTGATGTAGTTAACGACACATTTAAACGTGCATCAAAAGGTGTCTCTCTACTTTATGTGTGGTGCAAGAAAATCACAGGGAAAGAGGTACGATCCTTGACTCGTTCGTGTTGCCAGATCTTCCTAGAAAGCAAAAACAGCAAACAAGAACAAGACCATAATAAACCAAGATAAATCCAAATGCTTTATATTGAAAAAGAGTCCAAAATATTGCAGCCC

Function

NR:

description
KH domain-containing, RNA-binding, signal transduction-associated protein 1 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU225338 True 297 lncRNA 0.36 1 4358799 4359095

Neighbor

gene id symbol gene type direction distance location
CI01000046_04352237_04355463 ALDOAA, ALDOA, ALD, ALDOAB coding downstream 3308 4351849 ~ 4355491 (-)
CI01000046_04345411_04345806 NA coding downstream 12993 4345202 ~ 4345806 (-)
CI01000046_04336982_04343632 NA coding downstream 14745 4336705 ~ 4344054 (-)
CI01000046_04329752_04335164 PRPSAP2 coding downstream 23635 4328884 ~ 4335164 (-)
CI01000046_04279865_04297801 EPN2 coding downstream 60998 4279865 ~ 4297801 (-)
CI01000046_04374630_04379582 NA coding upstream 15415 4374510 ~ 4379588 (-)
CI01000046_04415076_04421680 NA coding upstream 55675 4414770 ~ 4421690 (-)
CI01000046_04440916_04442340 NA coding upstream 81463 4440558 ~ 4442359 (-)
CI01000046_04640883_04644188 TMEM98 coding upstream 280138 4639233 ~ 4644521 (-)
CI01000046_04647083_04657110 NA coding upstream 287415 4646505 ~ 4657274 (-)
G198522 NA non-coding downstream 102912 4255688 ~ 4255887 (-)
G198520 NA non-coding downstream 108474 4249088 ~ 4250325 (-)
G198515 NA non-coding downstream 114553 4243541 ~ 4244246 (-)
G198505 NA non-coding downstream 259179 4099160 ~ 4099620 (-)
G198487 NA non-coding downstream 277471 4080745 ~ 4081328 (-)
G198533 NA non-coding upstream 631 4359726 ~ 4359969 (-)
G198535 NA non-coding upstream 5106 4364201 ~ 4364493 (-)
G198538 NA non-coding upstream 11646 4370741 ~ 4371363 (-)
G198544 NA non-coding upstream 24888 4383983 ~ 4384495 (-)
G198545 NA non-coding upstream 26049 4385144 ~ 4385485 (-)
G198265 NA other downstream 558698 3665243 ~ 3800101 (-)
CI01000046_02866255_02867695 MRM2, FTSJ2 other downstream 1491005 2866070 ~ 2867794 (-)
G196463 NA other downstream 2190155 2168266 ~ 2168644 (-)
CI01000046_00777923_00780186 RPC11, POLR3K, POLR3K.S other downstream 3578506 774434 ~ 780293 (-)
G195098 NA other downstream 3682671 670736 ~ 676128 (-)
G199054 NA other upstream 1738264 6097359 ~ 6097674 (-)
G199014 NA other upstream 2005083 6364178 ~ 6375406 (-)
G199130 NA other upstream 2218885 6577980 ~ 6594210 (-)
G199181 NA other upstream 2467590 6826685 ~ 6830453 (-)

Expression


Co-expression Network