Gene
RNA
| Item | Value |
|---|---|
| gene id | G198505 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000046 |
| NCBI id | null |
| chromosome length | 7063170 |
| location | 4099160 ~ 4099620 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU225310 | True | 408 | lncRNA | 0.37 | 2 | 4099160 | 4099620 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000046_04021483_04023514 | GFER | coding | downstream | 75646 | 4020458 ~ 4023514 (-) |
| CI01000046_04013708_04017841 | SYNGR3, SYNGR3A | coding | downstream | 81319 | 4011908 ~ 4017841 (-) |
| CI01000046_03967726_03970443 | NA | coding | downstream | 128447 | 3967457 ~ 3970713 (-) |
| CI01000046_03951775_03952660 | BUD31, BUD31.L, BRAFLDRAFT_113775 | coding | downstream | 146117 | 3951181 ~ 3953043 (-) |
| CI01000046_03946243_03948935 | CPSF4 | coding | downstream | 149616 | 3946230 ~ 3949544 (-) |
| CI01000046_04125918_04128585 | CCDC97 | coding | upstream | 26267 | 4125887 ~ 4128585 (-) |
| CI01000046_04136250_04185791 | CACNA1H, CACNA1HA | coding | upstream | 36235 | 4135855 ~ 4185848 (-) |
| CI01000046_04279865_04297801 | EPN2 | coding | upstream | 180245 | 4279865 ~ 4297801 (-) |
| CI01000046_04329752_04335164 | PRPSAP2 | coding | upstream | 229264 | 4328884 ~ 4335164 (-) |
| CI01000046_04336982_04343632 | NA | coding | upstream | 237085 | 4336705 ~ 4344054 (-) |
| G198487 | NA | non-coding | downstream | 17832 | 4080745 ~ 4081328 (-) |
| G198486 | NA | non-coding | downstream | 19383 | 4078721 ~ 4079777 (-) |
| G198485 | NA | non-coding | downstream | 20712 | 4074670 ~ 4078448 (-) |
| G198483 | NA | non-coding | downstream | 28467 | 4070093 ~ 4070693 (-) |
| G198481 | NA | non-coding | downstream | 31941 | 4064673 ~ 4067219 (-) |
| G198515 | NA | non-coding | upstream | 143921 | 4243541 ~ 4244246 (-) |
| G198520 | NA | non-coding | upstream | 149468 | 4249088 ~ 4250325 (-) |
| G198522 | NA | non-coding | upstream | 156068 | 4255688 ~ 4255887 (-) |
| G198532 | NA | non-coding | upstream | 259179 | 4358799 ~ 4359095 (-) |
| G198533 | NA | non-coding | upstream | 260106 | 4359726 ~ 4359969 (-) |
| G198265 | NA | other | downstream | 299059 | 3665243 ~ 3800101 (-) |
| CI01000046_02866255_02867695 | MRM2, FTSJ2 | other | downstream | 1231366 | 2866070 ~ 2867794 (-) |
| G196463 | NA | other | downstream | 1930516 | 2168266 ~ 2168644 (-) |
| CI01000046_00777923_00780186 | RPC11, POLR3K, POLR3K.S | other | downstream | 3318867 | 774434 ~ 780293 (-) |
| G195098 | NA | other | downstream | 3423032 | 670736 ~ 676128 (-) |
| G199054 | NA | other | upstream | 1997739 | 6097359 ~ 6097674 (-) |
| G199014 | NA | other | upstream | 2264558 | 6364178 ~ 6375406 (-) |
| G199130 | NA | other | upstream | 2478360 | 6577980 ~ 6594210 (-) |
| G199181 | NA | other | upstream | 2727065 | 6826685 ~ 6830453 (-) |
