G198515


Basic Information

Item Value
gene id G198515
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 4243541 ~ 4244246 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU225320
CTTTGTGTTAGAGTTTCTTTATTCCCGCCTTTTTGTTTTTCAAATCTGTAACTGTCAAAGCCACATCATTACTGCTTTTCTGGAGCTCAGCCATCCAAATACAGACTGTCAACACACTCTCAACAGGTAAATGATTTCTTTCTTAAAATGTCTGTAAATTTTAACTTTCAAATTGTAACTGGTATCCTACCAATCATGTCTTTTTCTCTTTTTAGTTTAACAGAATATGTAGGTGTGACCAGCTCTGTTCAGTTAACAATACTTCTCTCCTCTTCTCAATTAAATGTTGTCACTCCCCACAGCCTCATCATCTGCAGAGAGAAACTACCACTCAATTACACCAAAATGATGGACTTAAAGACATTATCGAAGATTGTGAATATATTTCACTGGAACTTAGTCATACATCTATTTTCTGTTTCTAATTTGTGTTTTACTTCCTT

Function

NR:

description
PREDICTED: large proline-rich protein BAG6 isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU225320 True 443 lncRNA 0.35 2 4243541 4244246

Neighbor

gene id symbol gene type direction distance location
CI01000046_04136250_04185791 CACNA1H, CACNA1HA coding downstream 57693 4135855 ~ 4185848 (-)
CI01000046_04125918_04128585 CCDC97 coding downstream 114956 4125887 ~ 4128585 (-)
CI01000046_04021483_04023514 GFER coding downstream 220027 4020458 ~ 4023514 (-)
CI01000046_04013708_04017841 SYNGR3, SYNGR3A coding downstream 225700 4011908 ~ 4017841 (-)
CI01000046_03967726_03970443 NA coding downstream 272828 3967457 ~ 3970713 (-)
CI01000046_04279865_04297801 EPN2 coding upstream 35619 4279865 ~ 4297801 (-)
CI01000046_04329752_04335164 PRPSAP2 coding upstream 84638 4328884 ~ 4335164 (-)
CI01000046_04336982_04343632 NA coding upstream 92459 4336705 ~ 4344054 (-)
CI01000046_04345411_04345806 NA coding upstream 100956 4345202 ~ 4345806 (-)
CI01000046_04352237_04355463 ALDOAA, ALDOA, ALD, ALDOAB coding upstream 107603 4351849 ~ 4355491 (-)
G198505 NA non-coding downstream 143921 4099160 ~ 4099620 (-)
G198487 NA non-coding downstream 162213 4080745 ~ 4081328 (-)
G198486 NA non-coding downstream 163764 4078721 ~ 4079777 (-)
G198485 NA non-coding downstream 165093 4074670 ~ 4078448 (-)
G198483 NA non-coding downstream 172848 4070093 ~ 4070693 (-)
G198520 NA non-coding upstream 4842 4249088 ~ 4250325 (-)
G198522 NA non-coding upstream 11442 4255688 ~ 4255887 (-)
G198532 NA non-coding upstream 114553 4358799 ~ 4359095 (-)
G198533 NA non-coding upstream 115480 4359726 ~ 4359969 (-)
G198535 NA non-coding upstream 119955 4364201 ~ 4364493 (-)
G198265 NA other downstream 443440 3665243 ~ 3800101 (-)
CI01000046_02866255_02867695 MRM2, FTSJ2 other downstream 1375747 2866070 ~ 2867794 (-)
G196463 NA other downstream 2074897 2168266 ~ 2168644 (-)
CI01000046_00777923_00780186 RPC11, POLR3K, POLR3K.S other downstream 3463248 774434 ~ 780293 (-)
G195098 NA other downstream 3567413 670736 ~ 676128 (-)
G199054 NA other upstream 1853113 6097359 ~ 6097674 (-)
G199014 NA other upstream 2119932 6364178 ~ 6375406 (-)
G199130 NA other upstream 2333734 6577980 ~ 6594210 (-)
G199181 NA other upstream 2582439 6826685 ~ 6830453 (-)

Expression


Co-expression Network