CI01000047_05080583_05091592


Basic Information

Item Value
gene id CI01000047_05080583_05091592
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 5079334 ~ 5091965 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_05080583_05091592.mRNA
GTACATAAGCAGAGCATAAATTTCCCACTTTCCGTCAGCTCTCCCCTGAAATCCCAGTTTGGCAATGTGCTAAAAGCCTGCGTCACGCAACCATGCCAGAAAAGTACTAAAACACACAATCACCTGCATAATAGAAGCAATAATGTGGATAGTCAGTACTAATGATTGGATTTTTAAAACAAATCTGAGTCGTCTGCAGTGTCCATGATCACAGTTTTATTAGTGAACACTCTGTACTGTGTTTATTTTCTGTGCTAATCATCCATCCACATGAAGATCGTGTTCTCCTGTTTGTACTTCGGCATTCACATGCATTAGTGAAAAGAAACTTGCTACTTTCCATGAAATGTCAGATGAGAGTGCCTCTTACAGCCCACGTGTAATGAAGGTGCCATCACACACACTTTTACATCCTAATGCTTTTAAATAATTATGTTGGGAGAAACAGTTTATTTACTGGTTGTTATCAAACATTGATGTTTTTGACACACCTGCCAATGCTAGGTGAATTCAGAAAATGTATGGATCATTCATATTTCATTCGTGGCCATAACATTTTTATTTTCTAATGTTGTTGTCCTGAATTTTAATATTATTTTAGATCATATTTGGCTGTTATTATTACTAATTTTCAGGTTTTTAGCATGCATTCAATATATTAATTTATTTAAAAGTTTTTACTTGAATTTAACAGTTGTATTTGTATCTCTAATATTAACAAAATACTTTAATGTATTGCTCGCTGTTCATGTTTGTTAACGCATTAACTAACGTTAACTAATGGGACCTTGTTGTAAAATGTTATACACTATTTGATATTATTTTAGATAATATTTGACTATTACATCAACTAATATAATGCAAAAAAAAAAAAAAAAAATTTTGTTTTTTACTTCATCAAAATGATATGAACCTTTTTAACACTTGCCAATGCAAGCTGAATTCAGAAAATGTATGAATAATGTATATTTTTGATTGGCCATCAAATCTTACTTTTCATAATTTTATAATCATGCAATTGTGAATTTTAATAGTATTATTTGGCTGTATTTAATTATTAATTTTCAGGTTTTTAGCATGCATTCATTATATTAATTTATTTTAATTTATTTTTATCACCTTTCTCCACATTTCCCCTGATTTTCCTCACACTGATATACTGTAAATTTATACACCATCCATGAGGAATATAACTTTTGGAACAGCATTTGTCTTGAGTATTAGCATAAATGAACTAATAATCTGAAATATGGAGAGAAATATGCCAGCTGGCCTCTCAGTGGAGCGTGAGCGATGCAATCTGTGTCCACAGACCTTCGCTGAAAGCCCTGCAGATTTCTGTCAGGTTTCAGCAGCTGTCACTCACAACGTCCTGCTGGACATAATATATTCATCCCTTTCATACTCATTTTGGAATGCCAGTCCTATAGGGGTGGTCCTGACCGCAGTGGTGGGCGTGTCCTACACAATAGCTATTGCATATGAAGGACCATTCACTGAGGAGATCTATCGGCAGAGGAGCCAGCGCTGCAAGCACAAATAAAGACGGAGCGCGCTTGTGTAAAGATGACACCCAGATTCCCGATCCGCAGGAGCGCTGCTGACACTGCAAGCTCTTGGATAGAGATGGGTGGATACATAGCACATAGATCTTTAACACTACCGCAATGTTTAAACTTTTCTTTTAAATGCAAACTGTGAATGCAATGACAATCTTCAGTTGTAATCTGTAGTTTGCTCTTCATTGACATCACGTATCATAACCATAAATGGTTGTTTTTATTTCCTCAATCCATTCCTAATGCACGTCCAGGCTGAAAGCAGCTGTTTTAGGGTCCATTTGATTCATGTTCAGAGATTGAATGTACTTTGATCTGTTTTATGTGAGGATGCAGGTTTTTCTTTCCAAAGGTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_05080583_05091592.mRNA True 1916 mRNA 0.35 4 5079334 5091965

Neighbor

gene id symbol gene type direction distance location
CI01000047_05058628_05074146 NA coding upstream 4960 5058343 ~ 5074374 (+)
CI01000047_04890965_04891981 NA coding upstream 187203 4890965 ~ 4892131 (+)
CI01000047_04845691_04876128 LMF1 coding upstream 203206 4845691 ~ 4876128 (+)
CI01000047_04826817_04834995 NA coding upstream 244118 4826817 ~ 4835216 (+)
CI01000047_04678392_04690824 NA coding upstream 388237 4677992 ~ 4691097 (+)
CI01000047_05104311_05105437 RASD1 coding downstream 12236 5104201 ~ 5105897 (+)
CI01000047_05159134_05162486 NA coding downstream 65240 5157205 ~ 5162595 (+)
CI01000047_05185698_05212150 USP22 coding downstream 93733 5185698 ~ 5212224 (+)
CI01000047_05267807_05269108 NA coding downstream 175842 5267807 ~ 5269150 (+)
CI01000047_05315990_05318854 NA coding downstream 223619 5315584 ~ 5320411 (+)
G201856 NA non-coding upstream 6177 5072687 ~ 5073157 (+)
G201728 NA non-coding upstream 113484 4961445 ~ 4965850 (+)
G201722 NA non-coding upstream 118043 4947630 ~ 4961291 (+)
G201799 NA non-coding upstream 166589 4911286 ~ 4912745 (+)
G201773 NA non-coding upstream 290771 4787934 ~ 4788563 (+)
G201847 NA non-coding downstream 5620 5097585 ~ 5097981 (+)
G201848 NA non-coding downstream 16559 5108524 ~ 5109175 (+)
G201863 NA non-coding downstream 18023 5109988 ~ 5110202 (+)
G201869 NA non-coding downstream 27385 5119350 ~ 5119644 (+)
CI01000047_05468225_05478050 NA non-coding downstream 301466 5467089 ~ 5479506 (+)
G201599 NA other upstream 596877 4415813 ~ 4482457 (+)
G201387 NA other upstream 1377474 3696516 ~ 3701860 (+)
G201186 NA other upstream 1991147 3018705 ~ 3088187 (+)
G200076 NA other upstream 2501337 2520596 ~ 2577997 (+)
G200003 NA other upstream 2760372 2316863 ~ 2318962 (+)
G202382 NA other downstream 1723752 6815717 ~ 6816118 (+)

Expression


Co-expression Network