G201613


Basic Information

Item Value
gene id G201613
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 4420184 ~ 4425415 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU228799
AAAAATAGTGGAGCAATATCAGAAAGGAGTTTCTCAGAGAAAAATTGCAAAGAGTTTGAAGTTATCATCATCTACAGTGCATAACATCATCCAAAGATTCAGAGAATCTGGAACAATCTCTGTGCGTAAGGGTCAAGGCCGGAAAACCATACTGGATGCCAGTGATCTTCGGGCCCTTAGACAGCACTGCATCACATACAGGAATGCTACTGTAATGGAAATCACAACATGGGCTCAG

Function

NR:

description
PREDICTED: alpha-actinin-1 isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228799 True 238 lncRNA 0.42 2 4420184 4425415

Neighbor

gene id symbol gene type direction distance location
CI01000047_04222867_04253291 NA coding upstream 166473 4222682 ~ 4253711 (+)
CI01000047_04214987_04217836 VPS25 coding upstream 201707 4214987 ~ 4218477 (+)
CI01000047_04198702_04207295 FAM57B, FAM57BB coding upstream 212779 4198702 ~ 4207405 (+)
CI01000047_04183386_04192887 MAZ coding upstream 227158 4183386 ~ 4193026 (+)
CI01000047_04153298_04179343 TAOK2A, TAOK2, TAOK2B coding upstream 239318 4153298 ~ 4182449 (+)
CI01000047_04471595_04476690 SGCA coding downstream 45710 4471125 ~ 4477217 (+)
CI01000047_04582184_04586359 TMEM101 coding downstream 156589 4582004 ~ 4586796 (+)
CI01000047_04606043_04610846 G6PC3 coding downstream 180628 4606043 ~ 4611322 (+)
CI01000047_04663268_04663847 NA coding downstream 236900 4662315 ~ 4663996 (+)
CI01000047_04678392_04690824 NA coding downstream 252577 4677992 ~ 4691097 (+)
G201609 NA non-coding upstream 11412 4408518 ~ 4408772 (+)
G201555 NA non-coding upstream 70410 4286779 ~ 4349774 (+)
G201581 NA non-coding upstream 114932 4302574 ~ 4305252 (+)
G201526 NA non-coding upstream 355362 4063009 ~ 4064822 (+)
G201599 NA non-coding downstream 52936 4415813 ~ 4482457 (+)
G201639 NA non-coding downstream 114884 4540299 ~ 4540501 (+)
G201641 NA non-coding downstream 120478 4545893 ~ 4546137 (+)
G201642 NA non-coding downstream 121837 4547252 ~ 4547455 (+)
G201600 NA non-coding downstream 147953 4573368 ~ 4596630 (+)
G201387 NA other upstream 718324 3696516 ~ 3701860 (+)
G201186 NA other upstream 1331997 3018705 ~ 3088187 (+)
G200076 NA other upstream 1842187 2520596 ~ 2577997 (+)
G200003 NA other upstream 2101222 2316863 ~ 2318962 (+)
CI01000047_01749606_01752688 NA other upstream 2667347 1749606 ~ 1752688 (+)
G202382 NA other downstream 2390302 6815717 ~ 6816118 (+)

Expression


Co-expression Network