CI01000049_00593358_00626752


Basic Information

Item Value
gene id CI01000049_00593358_00626752
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 592977 ~ 626925 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000049_00593358_00626752.mRNA
GTATAAATGGAGATGGTGTGCATCCACTCATTCAGATTTGTTCTTCAGAGCTGAGTGATTGTTAATGCAGTCTCTCATACAGCCTGTGAGGGAATGCACAACTGGTGTTTACAGCGCATTGCAGCGGTCTCTCTCTCTCTCTCCACGGATAAGTGCAGAGAGCTCCCCTGGGTGCTAAAGAGCAGTTTCCCCTAAAAGAGCAAGCACAGATGGAAAGTTCCATGGTACGGTTTCCCTGACAGTTAACCCGAATACCAGACTGATTTTTTTTTTTTTTCCCCAGACAACAGACAACATAGGCTACAAAGTTTTTATTTTCTTAAAAAAAAGAGAATAATTTTATTTAGAGTAAATCACTGCCTTTGCTTTTGAAAGATCACCATGATCCAGTTGCAGCATTTAACAGACAGGGCAGACTGTTTGGTATACACCAAGCCACCACTTGTCAAAGAAGCAGTTGCGGCCCACCTGTGCCCAACCGCACGTGGGTGGAAGTCCACACCGTGGCTTCTTTTGAAGCTGCGCCGTGCTACCACCCACATCGCCGAGAAGGCATACACGGCAGCTGGCCACGCAGCATCCGCCATCCATACTATTCTGGTGCTGCAAGTTTTCCAGGTGAAGATGCTGCAGGCCTTGAACGAGAGGGGACCAGATTCTGAGTCATTCAGGAAGCTGCGCTCGGCCATGGACCTGGTGCTCAGAGTGACAAAAAAGACTACCCAGGGCATTGGTCGTAGCATGGACAGTCTTGTGGTCCTTCGGTGTCACTTGTGGGTCACGCTGACGAACGTACGAAACTCTGAGAAGGAACAGTTGCTGGATGTGCCCAGAAGTCCCCACGGCCTCTTTGACAAGTTCCTCAAAGCCCAGAAGCAGTCCAAAGTGCTGAGTCACTTCCTGTCTAAATGGGCTGCTGCCCCCTCACCACGCTCTAGATCTTTCTCTGCTCAGCATTCATTTAAGTATCAGGACAGCTCAACCACTGTATCTTGGTATCCTTCATTCCTGGTAGACTTTGCTGTGTTGCATCCATCTTTTCCTCCTCACTTTCACTTACACATTGTAAGCAGGTCCCTGTTCCAGTGTGGCTTACTGCGGGGCGTAAACCCTGTGCGTTCCCTCACATTCAGCACAAGTGTTCCCCTGGCATTCTCTGGTGGTCTTGTGCAGAGGTTGTCAGTACAGTGTAACCACTTTAAGAAAGAGTGGCACCCTGTAGGACATAAAACTGACTCAGACGCATCAGGGAGTGCTACAACCTCTCTCTTGCTGCGCGAGCGTGTAGTGTGCGATGGCAGAGGCGTCGCAGTGGGTGATGAACACAATCACGAGTGGTTTTTTGCTTCAGTTTGCATGCTTCAGCGGCGTGATGCTGGGGTATTCGCTCTCACCAGCTGCAAAGGCGTTTCCTTTTGTGGGCGGAGAGGAATAATGGATTTGTTCACATCAGAAGAGAGCACGCATTGCCAGCTGTTCTTTTCGCTGAGGAGTGCTTCCTTGGAAGGTGACGCACTATCAAGCAGCTGGCCAAAAAACCACAAGCATGCTGCCAAACTGGCCCAACCAGTCGTGGTTTCCAGAGTTAGTAGAACTCCTATCAGCTCCCCTGTGGCCAATTCACCCCAGGCCAGAACTATGGAACCTGATGCTGAGTGTGGCGCAACAGACTGGGAGCACATCATTTCCATTGGCTGTCAGTGGTGTCCGCTAGTTGAACAAACGACCGAAACCCCGAGAGACATTCAAGATGACTGTAGCGGTGAAGCTAGCACCGTGGCTAACAAGGCAGTGCTAGAGGGGATAGCTGCTCTACAATCAAACTTCCAGTTATTCAAGTCGGAGATAGTTGAGGCTATTGACAAGAGACTAGACCAGTTCTCGGCCTCCATTAGAGCAGAATTAACTGCTCTCAAAAAAGAGACTGATGTCACTATTTCAGCCATGAAAAGTACGATGGACGATCAAGCTAAAACAATGGCAGAGCTTGAACGTAGCGCAACTTTTACTTCGGATACGGTCTCTCAGTTACAAAAGGATGTCGAAAAGCTAACAAGCAGTGTCCTACAGCTCACTGAGAAATGTACGGACCTGGAAAGTCGCAGTAGACGGCAAAACCTGCGCATTCTAAATATTAAAGAGCGCGAGGAGACTGGGAGCAAAGCCACAGACTTTATTGCACACCTGCTGAAGAACGCGCTCTTGTTGGAAACGTTACCTCTGATCGACCGCGCTCACCGGAGTCCGCTTCGGTTTTTTGTACCCGGCGAAGTTACGGGTCACATAAAACGGAGGAGAAAAATACTTCACGGATCCGGTAGAGGGGATCACATTCGCAGAGCAGCACTTCGGGATCGTGGGAGGGGATGTTTAATAGGGTTCCGTCTGTGGGTGCGTTCTGCGCTTTGGCTTGACAAACTCACAAATACATTACATTTGGAGTGTATACGGCTCTGTCTAAGAAATAAGAGACAACAGTTTGCTAAAACTTGGGATCCCTTTATAAGATATTTAAGGGGAGAAGATGGAGGAGACCTGGAGAGAGATAATGAATGGCTGAAGACTAAAGTCACTGACTTGGAAGGGTGCAGCAGACGCCAGAATATCCGAATAGTGGGTCTCCCGGAGTCCATTGAAGGTCCTCGTCCTACCTTGTTTTTTTCCCAGCTCCTCATTGACGTCCTGGGGTCTCGGGTTCTCTCTTTGCCTCCTAAACTGGATAGGGCTCATTGGAGCCCGGCACCCAAGCCATTCTACGTTTCCATCGTTTCCAGGAAACCTATCTTAAACCTGCAGATTCAATGGGTTGGTCAGCTGTATCATTTATCTTTTATCAGTAATTCCAGAGGTGTTTCTATTTTTATTCATAGATCTGTGCCTTTTTCTGTTGGAGATGTAATCTCAGACCCTAATGGACGTTTTGTTATTGTCACTGCTTCAACAATATGGGAAACATGTAAGGCCTTTCTTAGGGAGGAAATCATTTCGTATGTTGCTTATTCCAATAAACTTGCCACAGAGAAGTCCTCCAGTTTACTCAAAAAATTAGCTGAACTTAAGTCAAGATGTGCCGGTTCACCAAGCTCAGACCTTGTGAACAAGTTGCTCACAACTAAGGCCGAATTCAATCTGTTAGCCACAGATGAGGCAATTGCAGCATTACAAATGTCTCGCTGTAAGCACTATGAGTTTGGTGATAAAGCAAGTAAATTATTATCTCATCAAATTCATCAGTTTTCTTCTTCTCATTTTATCACACAAATAGCTACCCCTTCTGGCACTACTGTGGATCCTCTTGTTATTAATGAACAGTTTAGGGATTTTTACGTCACTCTGTATTCCTCTGCAAACACAGCTGATGATTCACTTTATGATAGTTTCTTTCAGTATTTAGTTAGCCCATGTGTTAATTCTGATACTGCATCTAAACTGGAAGAGCCCATTACTTTGGAAGAAATTAAGGAAGCTATAAGTCTGGAATATTCCCGTCTGGAATCTTGCAGGTCTGGAAATCTCCAGGTTTCTAGTTCACGGATCACTGTTCTTTTTCTTGAGAAAGTCTCCTGGCTCCACTGGTTCAACTGGCCTTCTAGTCCTTCAGATCATCTTTCTCCAGGAGGTTACCCCATTCCAGACAAACATCCCAATGCTTATATCTGAAACAATAATCAAAAGAGGTTGCCCCCCTTTGCCCCACAATAATCTTTTCACATTTAAAACATCAAAGTCACAGAAGTTTAATCAGAGAATATTAAACATCAGTAATGTCTTAAATTAATTTTTAAAATTAATGCAAAACATTTCTCATAAACAACATTTACATATCAATGCCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000049_00593358_00626752.mRNA True 3833 mRNA 0.46 12 592977 626925

Neighbor

gene id symbol gene type direction distance location
CI01000049_00514310_00583480 FAM155A coding upstream 9497 514310 ~ 583480 (+)
CI01000049_00502964_00505708 LIG4 coding upstream 87166 502964 ~ 505811 (+)
CI01000049_00439527_00443722 IRS2A coding upstream 148674 439037 ~ 447286 (+)
CI01000049_00389394_00392865 NA coding upstream 199052 389394 ~ 393925 (+)
CI01000049_00379082_00388164 CARS2 coding upstream 204567 378973 ~ 388410 (+)
CI01000049_00814236_00838530 RAPH1B, RAPH1 coding downstream 187311 814236 ~ 838530 (+)
CI01000049_00854473_00859727 CPB2 coding downstream 227548 854473 ~ 859858 (+)
CI01000049_00864358_00887502 ZC3H13 coding downstream 237433 864358 ~ 887845 (+)
CI01000049_00914830_00917218 NA coding downstream 287905 914830 ~ 918214 (+)
CI01000049_00922883_00924745 NA coding downstream 295498 922423 ~ 924902 (+)
G205408 NA non-coding upstream 189948 402539 ~ 403029 (+)
G205327 NA non-coding upstream 192814 398132 ~ 400163 (+)
G205371 NA non-coding upstream 385521 207207 ~ 207456 (+)
G205370 NA non-coding upstream 385816 206954 ~ 207161 (+)
G205768 NA non-coding downstream 5792 632717 ~ 633195 (+)
G205774 NA non-coding downstream 12856 639781 ~ 640252 (+)
G205775 NA non-coding downstream 13985 640910 ~ 641239 (+)
G205776 NA non-coding downstream 14510 641435 ~ 641777 (+)
G205777 NA non-coding downstream 16119 643044 ~ 643289 (+)
CI01000049_01840330_01843844 FGF8B other downstream 1212890 1839815 ~ 1844077 (+)
G207888 NA other downstream 2997077 3624002 ~ 3624311 (+)
G208074 NA other downstream 3250471 3877396 ~ 3882211 (+)
CI01000049_04473766_04475768 GM10043, LSM6, SNRPF, BRAFLDRAFT_125735 other downstream 3846600 4473662 ~ 4476270 (+)
G209660 NA other downstream 6251208 6878133 ~ 6882030 (+)

Expression


Co-expression Network