G205408


Basic Information

Item Value
gene id G205408
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 402539 ~ 403029 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU233167
GTGAAAAAGTTCATTTTTTTATTGTAAATTATTTAAAAAAATGAAACTTTCATATATTCTAGATTCCCTACATGTAAAGTAAAACATTTCAAAAGTTTTTTTTTTTTAAATTTGTTGATTAGAGCGTACAGCTCATGAAAGTCCAAAATCCAGTATCTCAAAATATTAGAATATTTACATTTGAGTTTCATTAAATGACCATCCCTACAGTATAAATTCCGGGTATCTTTTGTTCTTTGAAACCACACTAATGGGGAAGACTGCTGACTTGGCAATGGTCCAGGAGACAATCATTGACACCCTCCACAAAGAGAGTAAGTCACAGAAGGTCATTACTGAATGGGGTGGCTGTTTACAGAGTGTATATCAAAGCATATTAAATGCAAAGTTGACTGGAAGGAAGAAATTGGGTAGGCAAAGGTGCACAAGCAACAGGGATGACCGCAAGCTTGAGAATACTGTCAAGTAAAGCCAATTCAAACACTTGGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU233167 True 491 lncRNA 0.35 1 402539 403029

Neighbor

gene id symbol gene type direction distance location
CI01000049_00389394_00392865 NA coding upstream 8614 389394 ~ 393925 (+)
CI01000049_00379082_00388164 CARS2 coding upstream 14129 378973 ~ 388410 (+)
CI01000049_00372677_00374333 UBE2A.L, UBE2A, UBE2B, UBE2AL, BRAFLDRAFT_128294 coding upstream 27630 371789 ~ 374909 (+)
CI01000049_00350921_00371213 NA coding upstream 31249 350028 ~ 371290 (+)
CI01000049_00326545_00329242 NA coding upstream 72603 326320 ~ 329936 (+)
CI01000049_00439527_00443722 IRS2A coding downstream 36008 439037 ~ 447286 (+)
CI01000049_00502964_00505708 LIG4 coding downstream 99935 502964 ~ 505811 (+)
CI01000049_00514310_00583480 FAM155A coding downstream 111281 514310 ~ 583480 (+)
CI01000049_00593358_00626752 NA coding downstream 189948 592977 ~ 626925 (+)
CI01000049_00814236_00838530 RAPH1B, RAPH1 coding downstream 411207 814236 ~ 838530 (+)
G205327 NA non-coding upstream 2376 398132 ~ 400163 (+)
G205371 NA non-coding upstream 195083 207207 ~ 207456 (+)
G205370 NA non-coding upstream 195378 206954 ~ 207161 (+)
CI01000049_00193856_00195437 NA non-coding upstream 206694 193656 ~ 195845 (+)
CI01000049_00087904_00099724 NA non-coding upstream 301103 87852 ~ 101436 (+)
G205752 NA non-coding downstream 208532 611561 ~ 611811 (+)
G205768 NA non-coding downstream 229688 632717 ~ 633195 (+)
G205774 NA non-coding downstream 236752 639781 ~ 640252 (+)
G205775 NA non-coding downstream 237881 640910 ~ 641239 (+)
CI01000049_01840330_01843844 FGF8B other downstream 1436786 1839815 ~ 1844077 (+)
G207888 NA other downstream 3220973 3624002 ~ 3624311 (+)
G208074 NA other downstream 3474367 3877396 ~ 3882211 (+)
CI01000049_04473766_04475768 GM10043, LSM6, SNRPF, BRAFLDRAFT_125735 other downstream 4070496 4473662 ~ 4476270 (+)
G209660 NA other downstream 6475104 6878133 ~ 6882030 (+)

Expression


Co-expression Network