G208801


Basic Information

Item Value
gene id G208801
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 5088146 ~ 5088427 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU236892
AAAAAAAAAAAAAAAAAAAATGTAAAAATGCAGAAAGTTTTCTGTGATGGGTAGGTTTAGGAGCAGGGTTAGGGGATAAAATATACTGTTTGTACAGTATAAAAATCATTATGTCTATGGAATGTCCCCATAAAACATGAAAACCCAATGTGTGTGTGTGTGTGTGTGTGTCATGTTTATTTTTATTTAAATAAAGCTAAATAAACTGATACTCTGTAACCAAAATAGGTGCACAGTTAATAAAATACACTGACAACCAGTTGGCAAAGATTCAAGGTCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU236892 True 282 lncRNA 0.32 1 5088146 5088427

Neighbor

gene id symbol gene type direction distance location
CI01000049_05040459_05065623 FAM193A coding upstream 21093 5039783 ~ 5067053 (+)
CI01000049_04974671_05034415 DCLK2A, DCLK2 coding upstream 53731 4974671 ~ 5034415 (+)
CI01000049_04865442_04887290 NA coding upstream 200767 4862971 ~ 4887379 (+)
CI01000049_04750403_04799247 ARHGAP10 coding upstream 287686 4750403 ~ 4800460 (+)
CI01000049_04724881_04735050 TMEM184C coding upstream 353027 4724881 ~ 4735119 (+)
CI01000049_05089807_05098784 SPARCL1 coding downstream 1380 5089807 ~ 5098983 (+)
CI01000049_05273122_05279358 NA coding downstream 184264 5272691 ~ 5279417 (+)
CI01000049_05319353_05347573 GALNTL6 coding downstream 230459 5318886 ~ 5352037 (+)
CI01000049_05431306_05477613 GALNTL6 coding downstream 342879 5431306 ~ 5478177 (+)
CI01000049_05489957_05511003 GALNT7 coding downstream 398095 5486522 ~ 5511003 (+)
G208798 NA non-coding upstream 1786 5086127 ~ 5086360 (+)
G208785 NA non-coding upstream 49173 5038753 ~ 5038973 (+)
G208748 NA non-coding upstream 161014 4926920 ~ 4927132 (+)
G208656 NA non-coding upstream 270992 4816643 ~ 4817154 (+)
G208669 NA non-coding upstream 444450 4637027 ~ 4643696 (+)
G208858 NA non-coding downstream 81950 5170377 ~ 5170655 (+)
G208859 NA non-coding downstream 86363 5174790 ~ 5175006 (+)
G208862 NA non-coding downstream 96185 5184612 ~ 5184825 (+)
G208802 NA non-coding downstream 341135 5429562 ~ 5515833 (+)
CI01000049_04473766_04475768 GM10043, LSM6, SNRPF, BRAFLDRAFT_125735 other upstream 611876 4473662 ~ 4476270 (+)
G208074 NA other upstream 1205935 3877396 ~ 3882211 (+)
G207888 NA other upstream 1463835 3624002 ~ 3624311 (+)
CI01000049_01840330_01843844 FGF8B other upstream 3244318 1839815 ~ 1844077 (+)
G209660 NA other downstream 1789706 6878133 ~ 6882030 (+)
CI01000049_07219171_07224229 NA other downstream 2130421 7218811 ~ 7224268 (+)
G210091 NA other downstream 2785323 7873750 ~ 7878856 (+)
CI01000049_08326623_08329601 NA other downstream 3239525 8326285 ~ 8329915 (+)

Expression


Co-expression Network