G208656


Basic Information

Item Value
gene id G208656
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 4816643 ~ 4817154 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU236738
TTAACTAAGAAAGAATGCAATGACAAAAGACATATATCATTTTTTGTTTGAAGTTTATTTAAAATATAGTTAACTATATAAATGTATATAAACTATATATAAAAAGACACATTTTGAGTACACGGTTATACCTGGAAATAAATCCTGTTCAAAGATATATGTGAGCATCACTTACCTGGCATTTGGTGTTTCTGCACTGGAGGAAAAAAAAAAAAGAAGGAAAAAAAAAAAAAAAAAAACACCTTTCCTGCTTCCAGTCAGTGATCTCAGTATCATATGCATGCAGTCCAATGTGGGCCAATATCTGGTCACTATGATTCTCAAATCTGTGAGATAAAAGAAAAAAAAAAACCCTCTGTGAGCATGCTGATAACAGGATCATATCAGCTATTGTATTAACGTTAATATAATGTCCACTCTTAACAGAAAACATGATTTTTGATTTCATGCATGCACGTATTATTGCACATCATGTGAAGAAAATTTTGTATAGGCCTATATTTTAAATTACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU236738 True 512 lncRNA 0.30 1 4816643 4817154

Neighbor

gene id symbol gene type direction distance location
CI01000049_04750403_04799247 ARHGAP10 coding upstream 16183 4750403 ~ 4800460 (+)
CI01000049_04724881_04735050 TMEM184C coding upstream 81524 4724881 ~ 4735119 (+)
CI01000049_04704214_04715966 EDNRAA coding upstream 99930 4703320 ~ 4716713 (+)
CI01000049_04590737_04592306 POU4F2 coding upstream 223551 4590737 ~ 4593092 (+)
CI01000049_04473766_04475768 GM10043, LSM6, SNRPF, BRAFLDRAFT_125735 coding upstream 340394 4473662 ~ 4476270 (+)
CI01000049_04865442_04887290 NA coding downstream 45817 4862971 ~ 4887379 (+)
CI01000049_04974671_05034415 DCLK2A, DCLK2 coding downstream 157517 4974671 ~ 5034415 (+)
CI01000049_05040459_05065623 FAM193A coding downstream 222629 5039783 ~ 5067053 (+)
CI01000049_05089807_05098784 SPARCL1 coding downstream 272653 5089807 ~ 5098983 (+)
CI01000049_05273122_05279358 NA coding downstream 455537 5272691 ~ 5279417 (+)
G208669 NA non-coding upstream 172947 4637027 ~ 4643696 (+)
G208643 NA non-coding upstream 192016 4624402 ~ 4624627 (+)
G208622 NA non-coding upstream 220684 4595093 ~ 4595959 (+)
G208614 NA non-coding upstream 230974 4585452 ~ 4585669 (+)
G208613 NA non-coding upstream 231688 4584594 ~ 4584955 (+)
G208748 NA non-coding downstream 109766 4926920 ~ 4927132 (+)
G208785 NA non-coding downstream 221599 5038753 ~ 5038973 (+)
G208798 NA non-coding downstream 268973 5086127 ~ 5086360 (+)
G208801 NA non-coding downstream 270992 5088146 ~ 5088427 (+)
G208858 NA non-coding downstream 353223 5170377 ~ 5170655 (+)
G208074 NA other upstream 934432 3877396 ~ 3882211 (+)
G207888 NA other upstream 1192332 3624002 ~ 3624311 (+)
CI01000049_01840330_01843844 FGF8B other upstream 2972815 1839815 ~ 1844077 (+)
G209660 NA other downstream 2060979 6878133 ~ 6882030 (+)
CI01000049_07219171_07224229 NA other downstream 2401694 7218811 ~ 7224268 (+)
G210091 NA other downstream 3056596 7873750 ~ 7878856 (+)
CI01000049_08326623_08329601 NA other downstream 3510798 8326285 ~ 8329915 (+)

Expression


Co-expression Network