Gene
RNA
| Item | Value |
|---|---|
| gene id | G209455 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000049 |
| NCBI id | null |
| chromosome length | 9665442 |
| location | 5886407 ~ 5887451 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU237604 | True | 620 | lncRNA | 0.48 | 3 | 5886407 | 5887451 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000049_05807016_05816424 | GPM6AA, DMB, GPM6A, GPM6AB | coding | downstream | 69983 | 5806494 ~ 5816424 (-) |
| CI01000049_05664017_05705638 | GLRA3 | coding | downstream | 180769 | 5663752 ~ 5705638 (-) |
| CI01000049_05649195_05660180 | HPGD | coding | downstream | 225316 | 5649051 ~ 5661091 (-) |
| CI01000049_05614731_05618336 | FBXO8 | coding | downstream | 268071 | 5613256 ~ 5618336 (-) |
| CI01000049_05535991_05536989 | HAND2.S, HAND2, HAND2.L | coding | downstream | 348923 | 5535475 ~ 5537484 (-) |
| CI01000049_05901108_05909136 | ASB5B, ASB5 | coding | upstream | 13209 | 5900660 ~ 5909185 (-) |
| CI01000049_05926968_05969885 | VEGFC | coding | upstream | 39232 | 5926683 ~ 5970122 (-) |
| CI01000049_06427734_06436267 | NA | coding | upstream | 540130 | 6427581 ~ 6436985 (-) |
| CI01000049_06621205_06636088 | NA | coding | upstream | 733738 | 6621189 ~ 6636088 (-) |
| CI01000049_06650349_06653460 | TMEM134 | coding | upstream | 762792 | 6650243 ~ 6653793 (-) |
| G209452 | NA | non-coding | downstream | 1300 | 5881416 ~ 5885107 (-) |
| G209238 | NA | non-coding | downstream | 238884 | 5645999 ~ 5647523 (-) |
| G209241 | NA | non-coding | downstream | 240686 | 5645321 ~ 5645721 (-) |
| G209342 | NA | non-coding | downstream | 310505 | 5575289 ~ 5575902 (-) |
| G209337 | NA | non-coding | downstream | 321144 | 5565014 ~ 5565263 (-) |
| G209465 | NA | non-coding | upstream | 22967 | 5910418 ~ 5911476 (-) |
| G209491 | NA | non-coding | upstream | 140783 | 6028089 ~ 6028469 (-) |
| G209503 | NA | non-coding | upstream | 177335 | 6064786 ~ 6065046 (-) |
| G209508 | NA | non-coding | upstream | 188055 | 6075506 ~ 6076086 (-) |
| G210739 | NA | non-coding | upstream | 358819 | 6246270 ~ 6246498 (-) |
| G207278 | NA | other | downstream | 3897640 | 1987011 ~ 1988767 (-) |
| G206938 | NA | other | downstream | 5058762 | 825859 ~ 827645 (-) |
| G206850 | NA | other | downstream | 5253212 | 632680 ~ 633195 (-) |
| G206849 | NA | other | downstream | 5254831 | 631143 ~ 631576 (-) |
| CI01000049_08056071_08059039 | TIMM10.S, TIMM10, TIMM10.L | other | upstream | 2168182 | 8055633 ~ 8059179 (-) |
| CI01000049_08452153_08453389 | CISD2 | other | upstream | 2563691 | 8451142 ~ 8454233 (-) |
| G211175 | NA | other | upstream | 2577842 | 8465293 ~ 8476265 (-) |
