G210217


Basic Information

Item Value
gene id G210217
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 8017301 ~ 8017535 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU238480
GCGTAGCGATCGTCTGCAAGCTATCAATGGTCAGCTGAACATATGTATTTAAACACACACAATACACCATCGCATTATCCTTGGATAACTTTTGAATCACTATAATGAATATAGCATATAGTGAATGAAGAATAATGAATTTATGAATTCACTACGTTCGTGTTGTCTACATTATATGCACTTAGGCGCCTATTGCCAACAAAACAGACATCTGAAGCAGTTCTGCGGTTCCGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU238480 True 235 lncRNA 0.38 1 8017301 8017535

Neighbor

gene id symbol gene type direction distance location
CI01000049_07972199_07972908 NA coding upstream 44161 7972043 ~ 7973140 (+)
CI01000049_07940922_07947928 TMX2B, TMX2 coding upstream 69055 7940922 ~ 7948246 (+)
CI01000049_07919606_07935459 SLC43A1B coding upstream 81716 7919606 ~ 7935585 (+)
CI01000049_07881589_07906998 NA coding upstream 109400 7881589 ~ 7907901 (+)
CI01000049_07855958_07856965 NA coding upstream 159405 7855326 ~ 7857896 (+)
CI01000049_08032079_08038636 CRYBA1L1, CRYBA1L2 coding downstream 13959 8031494 ~ 8039109 (+)
CI01000049_08106860_08114028 SLC43A3A coding downstream 88755 8106290 ~ 8114745 (+)
CI01000049_08148966_08152634 NA coding downstream 131198 8148733 ~ 8154358 (+)
CI01000049_08179306_08183518 NA coding downstream 161771 8179306 ~ 8184315 (+)
CI01000049_08189501_08208047 VWA11 coding downstream 171323 8188858 ~ 8208248 (+)
G210211 NA non-coding upstream 5821 8011175 ~ 8011480 (+)
G210205 NA non-coding upstream 26022 7990920 ~ 7991279 (+)
G210202 NA non-coding upstream 31362 7984263 ~ 7985939 (+)
G210177 NA non-coding upstream 104956 7912130 ~ 7912345 (+)
G210164 NA non-coding upstream 167167 7849512 ~ 7850134 (+)
G210130 NA non-coding downstream 28298 8045833 ~ 8049024 (+)
G210225 NA non-coding downstream 36798 8054333 ~ 8054664 (+)
G210226 NA non-coding downstream 46871 8064406 ~ 8065080 (+)
G210227 NA non-coding downstream 49503 8067038 ~ 8067412 (+)
G210228 NA non-coding downstream 50123 8067658 ~ 8068097 (+)
G210091 NA other upstream 138445 7873750 ~ 7878856 (+)
CI01000049_07219171_07224229 NA other upstream 720239 7218811 ~ 7224268 (+)
G209660 NA other upstream 1135271 6878133 ~ 6882030 (+)
CI01000049_04473766_04475768 GM10043, LSM6, SNRPF, BRAFLDRAFT_125735 other upstream 3541031 4473662 ~ 4476270 (+)
G208074 NA other upstream 4135090 3877396 ~ 3882211 (+)
CI01000049_08326623_08329601 NA other downstream 310417 8326285 ~ 8329915 (+)

Expression


Co-expression Network