G210227


Basic Information

Item Value
gene id G210227
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 8067038 ~ 8067412 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU238490
CATATACAAGTGTGTGTGTGTGTGTGTGTGTGAAAATCAAAAACCAATTTTTTATGCGCTGCTGCAACTTTTAACCCGTTGATGGAAAATAAAAATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTGAATAATAAGGTATCTAGTATTGTTCATGGAGCTGATAAAATACCTATAATAATTTAAAATGTTTACAAAAAGGTTTAAAGGCTGAAATGTGAGGCTTATCATTTTATGAAACTTTTTTGTCAATACTTTATTTGAACATGTACAGTGCCACTTGAAAGTATGTGAACCACTTGCAGAATCTGTGAAAATGTGAAAAATTTTAACAAAATAAGAGACAATACAAAATGCATGTTATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU238490 True 375 lncRNA 0.26 1 8067038 8067412

Neighbor

gene id symbol gene type direction distance location
CI01000049_08032079_08038636 CRYBA1L1, CRYBA1L2 coding upstream 27929 8031494 ~ 8039109 (+)
CI01000049_07972199_07972908 NA coding upstream 93898 7972043 ~ 7973140 (+)
CI01000049_07940922_07947928 TMX2B, TMX2 coding upstream 118792 7940922 ~ 7948246 (+)
CI01000049_07919606_07935459 SLC43A1B coding upstream 131453 7919606 ~ 7935585 (+)
CI01000049_07881589_07906998 NA coding upstream 159137 7881589 ~ 7907901 (+)
CI01000049_08106860_08114028 SLC43A3A coding downstream 38878 8106290 ~ 8114745 (+)
CI01000049_08148966_08152634 NA coding downstream 81321 8148733 ~ 8154358 (+)
CI01000049_08179306_08183518 NA coding downstream 111894 8179306 ~ 8184315 (+)
CI01000049_08189501_08208047 VWA11 coding downstream 121446 8188858 ~ 8208248 (+)
CI01000049_08215956_08230041 NA coding downstream 148544 8215956 ~ 8230121 (+)
G210226 NA non-coding upstream 1958 8064406 ~ 8065080 (+)
G210225 NA non-coding upstream 12374 8054333 ~ 8054664 (+)
G210130 NA non-coding upstream 18014 8045833 ~ 8049024 (+)
G210217 NA non-coding upstream 49503 8017301 ~ 8017535 (+)
G210211 NA non-coding upstream 55558 8011175 ~ 8011480 (+)
G210228 NA non-coding downstream 246 8067658 ~ 8068097 (+)
G210262 NA non-coding downstream 87247 8154659 ~ 8155060 (+)
G210241 NA non-coding downstream 163839 8231251 ~ 8231941 (+)
G210270 NA non-coding downstream 165307 8232719 ~ 8232953 (+)
CI01000049_08357834_08391102 NA non-coding downstream 320489 8357699 ~ 8394596 (+)
G210091 NA other upstream 188182 7873750 ~ 7878856 (+)
CI01000049_07219171_07224229 NA other upstream 769976 7218811 ~ 7224268 (+)
G209660 NA other upstream 1185008 6878133 ~ 6882030 (+)
CI01000049_04473766_04475768 GM10043, LSM6, SNRPF, BRAFLDRAFT_125735 other upstream 3590768 4473662 ~ 4476270 (+)
G208074 NA other upstream 4184827 3877396 ~ 3882211 (+)
CI01000049_08326623_08329601 NA other downstream 260540 8326285 ~ 8329915 (+)

Expression


Co-expression Network