G218045


Basic Information

Item Value
gene id G218045
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 1801292 ~ 1801551 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU247336
GAAAATGAGATGGAGTTTTTCGCCCTACCGTGATACTTCTGCCTACGTCACGCGTGACCTTTCCAACGTGATTACGTAATGCATGGCGCATCGCAGAGCAGTGCAAGATAAGCATTGGTGGTTAAAAAGTATATAATTTGTTTGGTCATTTTCTAAAAAAACAAAACAATCGTTTCGCTAGATAAGATGTCTCGTTTCTCGTCTGAGATCATGTAGAGCCCTTTGAAGCTGCAATTTGGACCTTCAACCCGTTGAGCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247336 True 260 lncRNA 0.43 1 1801292 1801551

Neighbor

gene id symbol gene type direction distance location
CI01000051_01765268_01780393 NA coding upstream 18878 1765035 ~ 1782414 (+)
CI01000051_01669393_01716229 NA coding upstream 84024 1669326 ~ 1717268 (+)
CI01000051_01636300_01644607 MEP1B coding upstream 156643 1636300 ~ 1644649 (+)
CI01000051_01630035_01632795 NA coding upstream 167965 1630035 ~ 1633327 (+)
CI01000051_01628114_01629925 NA coding upstream 171340 1627716 ~ 1629952 (+)
CI01000051_01945810_01948306 NA coding downstream 144259 1945810 ~ 1948486 (+)
CI01000051_01965924_01969562 NA coding downstream 164152 1965703 ~ 1969602 (+)
CI01000051_01976321_01985259 PCSK9 coding downstream 174529 1976080 ~ 1986159 (+)
CI01000051_02060996_02061735 NA coding downstream 259445 2060534 ~ 2062355 (+)
CI01000051_02280290_02283028 NA coding downstream 478739 2280290 ~ 2283368 (+)
G218044 NA non-coding upstream 184 1800877 ~ 1801108 (+)
G218037 NA non-coding upstream 9498 1791534 ~ 1791794 (+)
G218001 NA non-coding upstream 116772 1683934 ~ 1684520 (+)
G218000 NA non-coding upstream 124150 1676943 ~ 1677142 (+)
G217999 NA non-coding upstream 133569 1667431 ~ 1667723 (+)
G218070 NA non-coding downstream 82494 1884045 ~ 1884370 (+)
G218090 NA non-coding downstream 143319 1944870 ~ 1945102 (+)
G217966 NA non-coding downstream 159553 1961104 ~ 1962643 (+)
G217968 NA non-coding downstream 191822 1993373 ~ 2003164 (+)
G218103 NA non-coding downstream 220444 2021995 ~ 2022494 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 1076588 637590 ~ 720669 (+)
G217075 NA other upstream 1417164 324465 ~ 384128 (+)
G218981 NA other downstream 1443892 3245443 ~ 3246873 (+)
CI01000051_04374052_04393328 NA other downstream 2572859 4372658 ~ 4393677 (+)
G219803 NA other downstream 3113423 4914974 ~ 5052033 (+)
CI01000051_06825895_06830637 NA other downstream 5024248 6825895 ~ 6830637 (+)

Expression


Co-expression Network