G218001


Basic Information

Item Value
gene id G218001
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 1683934 ~ 1684520 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU247291
GTGTGTGTTTGTGTGTGAGAGAGTTGCCAGCTGTGGCGTTTTATCATGCATGCCTGGTATTTGGATTTCAGCCTCTTGAGACTAGAGAAGCTTTACTGGTTTAGTTAAAAAGACTCTGTTTTTCACCAGTTCACATACTGACCAGTTTTGCCGTTGTCGGATCAGTCTAGGTGTCTTTCACTACTATATATTTAAGTAGTGTACTTAATGTGTTCATGTTGTATTGAAAAACACTTTTTCTGCTATTGAGGTGGGATACGGGTAAGGTACGGGGCAGGTTTGGTGATCTGGTTAGGTTAAAGGGTTGGTTAAAGGGATAGTTCACCCAAAAATTTAAATTCTGTCATTAATTACCCACCCTCATGTTGTTCCACACTCGTAAGACCTTCATTCATCTTCGGAACACAAATTAAGATATTTTTGATAAAATCCAATGGCTCAGTGAGGCCTCTATTGCCAGCAAGATAATTTACACTTTCAGATGCCCAGAAAGGTACTAAAAACATATTTAAAACAGTTCATGTGACTAGGTTCAACCTTAATGTTATGAAGCGATGAGAATACTTTTTGTGCACAAAAAACCCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247291 True 587 lncRNA 0.39 1 1683934 1684520

Neighbor

gene id symbol gene type direction distance location
CI01000051_01636300_01644607 MEP1B coding upstream 39285 1636300 ~ 1644649 (+)
CI01000051_01630035_01632795 NA coding upstream 50607 1630035 ~ 1633327 (+)
CI01000051_01628114_01629925 NA coding upstream 53982 1627716 ~ 1629952 (+)
CI01000051_01502977_01503138 NA coding upstream 180671 1502843 ~ 1503263 (+)
CI01000051_01457945_01462388 TTR coding upstream 221332 1457899 ~ 1462602 (+)
CI01000051_01765268_01780393 NA coding downstream 80515 1765035 ~ 1782414 (+)
CI01000051_01945810_01948306 NA coding downstream 261290 1945810 ~ 1948486 (+)
CI01000051_01965924_01969562 NA coding downstream 281183 1965703 ~ 1969602 (+)
CI01000051_01976321_01985259 PCSK9 coding downstream 291560 1976080 ~ 1986159 (+)
CI01000051_02060996_02061735 NA coding downstream 376476 2060534 ~ 2062355 (+)
G218000 NA non-coding upstream 6792 1676943 ~ 1677142 (+)
G217999 NA non-coding upstream 16211 1667431 ~ 1667723 (+)
G217946 NA non-coding upstream 114721 1550703 ~ 1569213 (+)
G217936 NA non-coding upstream 168025 1515657 ~ 1515909 (+)
G217934 NA non-coding upstream 193055 1490662 ~ 1490879 (+)
G218037 NA non-coding downstream 107014 1791534 ~ 1791794 (+)
G218044 NA non-coding downstream 116357 1800877 ~ 1801108 (+)
G218045 NA non-coding downstream 116772 1801292 ~ 1801551 (+)
G218070 NA non-coding downstream 199525 1884045 ~ 1884370 (+)
G218090 NA non-coding downstream 260350 1944870 ~ 1945102 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 959230 637590 ~ 720669 (+)
G217075 NA other upstream 1299806 324465 ~ 384128 (+)
G218981 NA other downstream 1560923 3245443 ~ 3246873 (+)
CI01000051_04374052_04393328 NA other downstream 2689890 4372658 ~ 4393677 (+)
G219803 NA other downstream 3230454 4914974 ~ 5052033 (+)
CI01000051_06825895_06830637 NA other downstream 5141279 6825895 ~ 6830637 (+)

Expression


Co-expression Network