G217999


Basic Information

Item Value
gene id G217999
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 1667431 ~ 1667723 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU247289
TGAAAGTGAAGTGAACATCTCCCATGGCCTGAACAGTCACCAAATCTAAATATTTTTGAGCAACTTTGGGGTATTTTTGAGGAGTGAGTGAAAAAAGTTTTTTTTTTCTCCCCACCAGCATCACATAGTTGATCACCTGGCCGCTCTTCTGGAAGAGAAATGTGGCAAAATCTCTCTGGCCACTGTCATTCCCAAGACAAACCGATGCTATATTGGCCTCAAAAGACAGCCCTGCACCATACTAATAAATTGTTGTGGTCTAAAACCATGTGTTTCAGTTTCATTGTCCAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247289 True 293 lncRNA 0.42 1 1667431 1667723

Neighbor

gene id symbol gene type direction distance location
CI01000051_01636300_01644607 MEP1B coding upstream 22782 1636300 ~ 1644649 (+)
CI01000051_01630035_01632795 NA coding upstream 34104 1630035 ~ 1633327 (+)
CI01000051_01628114_01629925 NA coding upstream 37479 1627716 ~ 1629952 (+)
CI01000051_01502977_01503138 NA coding upstream 164168 1502843 ~ 1503263 (+)
CI01000051_01457945_01462388 TTR coding upstream 204829 1457899 ~ 1462602 (+)
CI01000051_01669393_01716229 NA coding downstream 1603 1669326 ~ 1717268 (+)
CI01000051_01765268_01780393 NA coding downstream 97312 1765035 ~ 1782414 (+)
CI01000051_01945810_01948306 NA coding downstream 278087 1945810 ~ 1948486 (+)
CI01000051_01965924_01969562 NA coding downstream 297980 1965703 ~ 1969602 (+)
CI01000051_01976321_01985259 PCSK9 coding downstream 308357 1976080 ~ 1986159 (+)
G217946 NA non-coding upstream 98218 1550703 ~ 1569213 (+)
G217936 NA non-coding upstream 151522 1515657 ~ 1515909 (+)
G217934 NA non-coding upstream 176552 1490662 ~ 1490879 (+)
G217893 NA non-coding upstream 198640 1465253 ~ 1468791 (+)
CI01000051_01367599_01369326 NA non-coding upstream 287816 1367439 ~ 1369436 (+)
G218000 NA non-coding downstream 9220 1676943 ~ 1677142 (+)
G218001 NA non-coding downstream 16211 1683934 ~ 1684520 (+)
G218037 NA non-coding downstream 123811 1791534 ~ 1791794 (+)
G218044 NA non-coding downstream 133154 1800877 ~ 1801108 (+)
G218045 NA non-coding downstream 133569 1801292 ~ 1801551 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 942727 637590 ~ 720669 (+)
G217075 NA other upstream 1283303 324465 ~ 384128 (+)
CI01000051_02060996_02061735 NA other downstream 392264 2060534 ~ 2062355 (+)
G218981 NA other downstream 1577720 3245443 ~ 3246873 (+)
CI01000051_04374052_04393328 NA other downstream 2706687 4372658 ~ 4393677 (+)
G219803 NA other downstream 3247251 4914974 ~ 5052033 (+)
CI01000051_06825895_06830637 NA other downstream 5158076 6825895 ~ 6830637 (+)

Expression


Co-expression Network