G217946


Basic Information

Item Value
gene id G217946
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 1550703 ~ 1569213 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU247231
ATTTACTCACCCTCATGTNNNNNNNNNNNNNNAAGACTTTCGTTCATATTCAAAACACAAATTAAGCCATTTTTAATGAAACCTGAGATTTTTCTGCCCATTCTACCAAACACTTCATAAAGCTCATACAGACATTGTAAAAGAAAACCATATGAAGTCATCTCAAAAAAACCAAGTGTGTCCGACTACGTCCCGCAGTACTACAAACCACGCCCCTACTAATTACGCCCCCTGCAATGAAACAGCCATTCAGGATGTCATCAGAGCCCCACCCGCTGATGTCATCACTAGTGCTGCTCTTCTTCTACTTCACCTTCTTTGTTTTTTAAGCTTCACTTTCGCCACCTAGTGATGAGGCATATAGATCGTATAACATCACCATTTTAATTATTAAGTATTTTAATTATGAAGCTTAACAGTAAATTTTATTTTTATGGAAAGGGTAGGTTTAGGGTAAGGTTTAGGTGTGGGGGTAGGTTTTTAGCTATAATTACCATGTATTAATTTGTAGGGCTGCCTTTGACTAAAAAATTTTCTGGTCGACTAGTAGTCGTTCATATTAAGCATTAGTCGACTAATCGCACGTGTATTAATAAACCATATAAATCATAATAATGAGCCTTTAATGCCTAAATAGCCTAATCAGCGCTTAAGCGCATGCATAAAGCTTGCCACAGCACACAAGCAGAAGTAATAATTATAAATGCGTCAGGGAAATACAGCAAGGAGAATGTTTTAACATTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247231 True 745 lncRNA 0.36 2 1550703 1569213

Neighbor

gene id symbol gene type direction distance location
CI01000051_01502977_01503138 NA coding upstream 47440 1502843 ~ 1503263 (+)
CI01000051_01457945_01462388 TTR coding upstream 88101 1457899 ~ 1462602 (+)
CI01000051_01439230_01450774 NA coding upstream 99443 1438443 ~ 1451260 (+)
CI01000051_01419542_01436241 NA coding upstream 114372 1419049 ~ 1436331 (+)
CI01000051_01401065_01414909 NA coding upstream 134771 1399717 ~ 1415932 (+)
CI01000051_01628114_01629925 NA coding downstream 58503 1627716 ~ 1629952 (+)
CI01000051_01630035_01632795 NA coding downstream 60822 1630035 ~ 1633327 (+)
CI01000051_01636300_01644607 MEP1B coding downstream 67087 1636300 ~ 1644649 (+)
CI01000051_01669393_01716229 NA coding downstream 100113 1669326 ~ 1717268 (+)
CI01000051_01765268_01780393 NA coding downstream 195822 1765035 ~ 1782414 (+)
G217936 NA non-coding upstream 34794 1515657 ~ 1515909 (+)
G217934 NA non-coding upstream 59824 1490662 ~ 1490879 (+)
G217893 NA non-coding upstream 81912 1465253 ~ 1468791 (+)
CI01000051_01367599_01369326 NA non-coding upstream 171088 1367439 ~ 1369436 (+)
G217847 NA non-coding upstream 330306 1220156 ~ 1220397 (+)
G217999 NA non-coding downstream 98218 1667431 ~ 1667723 (+)
G218000 NA non-coding downstream 107730 1676943 ~ 1677142 (+)
G218001 NA non-coding downstream 114721 1683934 ~ 1684520 (+)
G218037 NA non-coding downstream 222321 1791534 ~ 1791794 (+)
G218044 NA non-coding downstream 231664 1800877 ~ 1801108 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 825999 637590 ~ 720669 (+)
G217075 NA other upstream 1166575 324465 ~ 384128 (+)
CI01000051_02060996_02061735 NA other downstream 490774 2060534 ~ 2062355 (+)
G218981 NA other downstream 1676230 3245443 ~ 3246873 (+)
CI01000051_04374052_04393328 NA other downstream 2805197 4372658 ~ 4393677 (+)
G219803 NA other downstream 3345761 4914974 ~ 5052033 (+)
CI01000051_06825895_06830637 NA other downstream 5256586 6825895 ~ 6830637 (+)

Expression


Co-expression Network