G217893


Basic Information

Item Value
gene id G217893
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 1465253 ~ 1468791 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU247177
TCATTACAGAGTGAAACGCAGTGAACAGACTGGTACAACAAAAACAAAACAAAAAAAGTCTGGAACCAGGATTGTACATGTCAGTCAAAGCAGCTGGCATCTCAACACATTCTGCTTCTCATACTGGTGTTACAGTTAAAGTGGACCCTCAATGTTGGAGAAACAAACACAGGAGAATATCCTCATGTTTTTTTTTTAGTTCCCACTGAATGACCAGCAGACATTTTAGATTTATAGACAGCTCCAGATTGAAATAAAAAACTGTTAAAGAAAAATGTAAATGTGCTCCCGATTCTAATTTTAAACACCATCCACACACACCCCACTGCACATCTCAACAATGCGAAATTGAAAAGGGAAAAAAAAATAAAAAAATCAAGGCACAAATATGAATACTGCAAAAATTGAACACTCTACACATTACAGATATGTAATGGTGAATAAATCATCTTTTTAAATTTTCTATCTATTGTTTCTTCTGGATATTTTCAAAAGACAGCTGAACAGGATGGGGCAGCTAGGAGAGGGGTTGGTTTGGGGTGGAAAATGAGATGAACCTTAAATTAGAAGACAAATGACAGCACTGAACAAAGCTCCCTCAAAAGCTACAACTGATTAACCACCAGATCCAAACACACCAGAGCAGTCTCACCGGTACGTTTCCCATAATATTAAAAAAGCACATTTCATATCAGGGGAATGGAGCGTGACCACATTCACCACCACAAAAAAAAATAAAAAATAAAATAAAAAATAAAATTCAAATCAACTTAACATTCAATATTCATATTGCAACCCACCTCACTTTAAGAACAATGTGTAACTTTCAGTACCCATCTGTGTAACCAAATAAAAGCGTTTTGCAAGCTAATGATTAACACAATCCATAACAGGCCTATCCGACTCCGTATTGCAGCACAAGACCACTTCTTTACTCCGTTAGCACATGAAAGTGCGGCCTACCGCCTGCAAAACAAGAAAACAGTGCACTGTGAAGATGGAATGATACTCGTTTATTTGAGCATTCTGGAAACTAGTACCTGTAAGCCACACTTCCCCTCTTTGAAAGCCTATAATCGGTCTAAAATGCCTCTATTTTTACATTAAACAACACATATTAATCTCACCAGCTGCTTCAACATGAACACAGAGCGTAAAACAACAGCTTAGCATCCCACATTGGATGCCAAATTTGCCTAAACTTTGCTTATGTAAATTTGTTGGCCCCGTGCAGTGGAAAAGCGAGGCGAGGGGTTTTTCAGCCTTCATTCTATAGCCTAACGCAATCCTCTCACACTAGACTGCATATGACACAAACTCATACACAAACTCGCTTCACGCATACCGAAAAACACTCGCAGATCTTCAAAGTGACTGGCTTGAAAAATCCTAGAGCTACATTTTACCACACAATGCTGAATGAGTGAAAAGGAGGTGATCAATGAGGAAAAGTGGACTTTGGCACCATTAACCTCCATTTAAGTATATTATATTCAGTTAATTTCAGAAAATGACAGAATTCTTCAATTCCTCGTCTGAGTTGGTCAAATGTTTTTGTAACCCGTAACCACAGTAAACGGGTCTGATTAGACCCAACTGCGAGTCTGATGGTTTAAGAGGAGACTGTAAACAACAGACTGGGCACTGGAGATCACGTCGGGGTCACCATCAATGGGAAAAGACCATACTAGAGTTTAAGAAATCATCCACTCAGAAAAAGACAAAGCAAGCAGAGGACCTCAGAGATGCCATGGCTCAACTACACTTCAGAGACATGCGGATGGAAAGAACCTACAAAAAGCCTCGGAAGCAGGCGCAATAAAGCGTTTTTGTGAGCTGTAAGTGTCTCAACTTCAAGTGTCAGAAAGTCCAGTTAATGTCGCAAAGCATGCTGCTGACAAAATCTCCCCCTCGATGTGCAATTCTGAGTGGAAGGACACACACACACACACACACACACACAGACAGCATGAGAGGATATGAAATAGCAGTTTTAGGACATTTATATGATAACTTAAAATATACACAAAAAAAAACTAAAGTACATCGACAACTCCAAAAAAATAAAAATATATACAAAAGGCAAACATATACCAACAGCTTGTAATGCTCAAAACTTTAACAGCATAAAGTCGTCATGGCCCAAGGGTACTCCAAATGCCATTCAAGAGCAACTTGCGAAGTCGCTCTCTCATCTTGGCCCTACAGGAGTGCAACGTCACCCAGTATTTCATACTGAGAGCTACACACACGAACAGACAAAAACACACAGGTTGAGACACATGCCAAACCCTGTGAAGGGCGTTTTGGCTTTAGCAGCTGCGAACCTGACTGACCAACAGGTTATCCTGTGAAGGACCTGTCTTTTAAACACCGTTTCAGTCATATCTTTCACTACCATGGAGTGCATTTCAAAAACGAGACATGAGAATGATTACGCTATTAACAAAAGCAAAGACGAAAAAAAATCAATATGACTAAAAAATATAATTCTTTAAGACACAAAATAAGCATTTAGCAAAAAATAAATTAAGGCATGCAGCAGGTAATGATATCTATATTTCGTTTTTGATTTTTTGTTTGCATTCTACAGTTACTGAAATTATTTGACCGGCAGTCGTGTGTCCCAAACTATTGAAGAAAAAAAAAATAATTAACAGAAGTCAAAAACAACAATTAGCTGCCAAAAAGAAGAGTGTTTCCACTGGAATCACAGGCGTCTTTTGGGGGCCTAAAGCATTGTTTAAAAGGCCAGTTATTTACAAGGGAGTCAGGGCCATGCATGCAACTTGTCACAGCCTTCTGTTTAGCCATGGAATTAGGGAAAAAATAAAACTGTAGCACACCACCAAGGTGAAATGTATATCGTAATACAAGAACAAAAGGTGAAGTACAGATTTAAAATACATCCATTTAAACTGCATTGATGTCTTCTTTTTAAAAAAACGATATGTATAAAAAAATTATACTAACAGAACATGACAAAATGTCTATTGGCGTCAAGAGTGCTGTTGCCATGTAAAACCAAGCTTTCTACAATGTAGATCTACAGAGTTTGATAGCCTATAAAATTCAATTAAGGCTTTGCAGTAAACATCTGATTTGTTGACGCTGGCACTCCCCACCTTTTTTAAAATGTGTTGTGATCTGATTCGCTAAAGCCAGCATGGACACAGGAACATGCAATTAAACACGCAGTCACGCTAATACACTTTCACAGATATGATCCAGTAATCGTACACACGCACACACACTCACGTCACACAACTAACTGTGCATTAGACAGGCCTTTGCCCTCTTCACTCCTGTTTTTAAGGGCATTTGGCATCACATTTTCTGACACGGGGTCACACCGAGGGGGCGAAGCCTGTCAGTATTCTGCTATGGGTGCGAGCTCGGGATTCAGATTGACCGTGATGTTCTTATACAGGCTGCTCAGAGAGATCTCCGGAGAGTACTGCAGATTGTTCAAGCCGTCTAGATGCTGTCGCTCTTTAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247177 True 3499 lncRNA 0.39 2 1465253 1468791

Neighbor

gene id symbol gene type direction distance location
CI01000051_01457945_01462388 TTR coding upstream 2651 1457899 ~ 1462602 (+)
CI01000051_01439230_01450774 NA coding upstream 13993 1438443 ~ 1451260 (+)
CI01000051_01419542_01436241 NA coding upstream 28922 1419049 ~ 1436331 (+)
CI01000051_01401065_01414909 NA coding upstream 49321 1399717 ~ 1415932 (+)
CI01000051_01367599_01369326 NA coding upstream 95840 1367439 ~ 1369436 (+)
CI01000051_01502977_01503138 NA coding downstream 34052 1502843 ~ 1503263 (+)
CI01000051_01628114_01629925 NA coding downstream 158925 1627716 ~ 1629952 (+)
CI01000051_01630035_01632795 NA coding downstream 161244 1630035 ~ 1633327 (+)
CI01000051_01636300_01644607 MEP1B coding downstream 167509 1636300 ~ 1644649 (+)
CI01000051_01669393_01716229 NA coding downstream 200535 1669326 ~ 1717268 (+)
G217847 NA non-coding upstream 244856 1220156 ~ 1220397 (+)
G217845 NA non-coding upstream 246185 1218783 ~ 1219068 (+)
G217830 NA non-coding upstream 269551 1195450 ~ 1195702 (+)
G217812 NA non-coding upstream 286982 1178026 ~ 1178271 (+)
G217934 NA non-coding downstream 21871 1490662 ~ 1490879 (+)
G217936 NA non-coding downstream 46866 1515657 ~ 1515909 (+)
G217946 NA non-coding downstream 81912 1550703 ~ 1569213 (+)
G217999 NA non-coding downstream 198640 1667431 ~ 1667723 (+)
G218000 NA non-coding downstream 208152 1676943 ~ 1677142 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 740549 637590 ~ 720669 (+)
G217075 NA other upstream 1081125 324465 ~ 384128 (+)
CI01000051_02060996_02061735 NA other downstream 591196 2060534 ~ 2062355 (+)
G218981 NA other downstream 1776652 3245443 ~ 3246873 (+)
CI01000051_04374052_04393328 NA other downstream 2905619 4372658 ~ 4393677 (+)
G219803 NA other downstream 3446183 4914974 ~ 5052033 (+)
CI01000051_06825895_06830637 NA other downstream 5357008 6825895 ~ 6830637 (+)

Expression


Co-expression Network