G223456


Basic Information

Item Value
gene id G223456
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000052
NCBI id null
chromosome length 3494004
location 1055429 ~ 1055946 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU253470
GCCCTAATATGGAGATGAATTTTATGGTCATTTTTGTCTGGTTTACCTTCAAATCAATTGAGCTCTGGTTTTAAGCTGAACCGTATTAAGTATTTGTTTCATTCAGACTACAGAAACACTCAAGCAGGGATATTCTGAATTCACCCTAAATCTCCAACGTACATTCATTCATTCGCCAAAGGCCATGCGGCTCTCTTAACAGGAATTAAGGAAAGTTTGATTTAACATTTCTAAATATGGCAAGAGCTTATGTGGTATCGTATTATGTTTACAAAATTAATAGCTTAAAGCTCTTTCTTTAAAACAACATTAACAGCATGTCGCAACAGTCAAGAGCACAACACGACAGACCGCAAGTTAGAGAAGTGAACAGATAAACAAACACAGCAAGAGGTTACCATTCCCGTTCGACTGCTTGTGAGAGACACATGCAATTTATTTCGGATTTAGTTTATATTAGTTCTTATCTGTGATACCTACATGCTGATAACTTTATCGCTGTCACATCAGCTGTCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253470 True 518 lncRNA 0.37 1 1055429 1055946

Neighbor

gene id symbol gene type direction distance location
CI01000052_01044855_01046432 NA coding upstream 8812 1044855 ~ 1046617 (+)
CI01000052_00906265_00916799 SEMA3B coding upstream 138616 904556 ~ 916813 (+)
CI01000052_00836931_00841228 TMEM51A coding upstream 213996 835368 ~ 841433 (+)
CI01000052_00793472_00831585 KAZNA coding upstream 223476 793472 ~ 831953 (+)
CI01000052_00714377_00725358 ZYMND12 coding upstream 330040 714377 ~ 725389 (+)
CI01000052_01143235_01145343 NA coding downstream 87210 1143156 ~ 1147150 (+)
CI01000052_01295531_01298937 NA coding downstream 238248 1294194 ~ 1299203 (+)
CI01000052_01368837_01373810 OPN7C coding downstream 312891 1368837 ~ 1374198 (+)
CI01000052_01383491_01401660 NA coding downstream 326204 1382150 ~ 1402229 (+)
CI01000052_01405500_01408668 TPP1, TAF10 coding downstream 347868 1403814 ~ 1408862 (+)
G223429 NA non-coding upstream 2074 1052311 ~ 1053355 (+)
G223485 NA non-coding upstream 3815 1051249 ~ 1051614 (+)
G223461 NA non-coding upstream 5231 1049270 ~ 1050198 (+)
G223442 NA non-coding upstream 7320 1047533 ~ 1048109 (+)
G223451 NA non-coding upstream 13194 1037267 ~ 1042235 (+)
G223419 NA non-coding downstream 1288 1057234 ~ 1058567 (+)
G223504 NA non-coding downstream 96346 1152292 ~ 1155250 (+)
G223509 NA non-coding downstream 104217 1160163 ~ 1162309 (+)
G223520 NA non-coding downstream 120430 1176376 ~ 1178325 (+)
G223460 NA non-coding downstream 170614 1226560 ~ 1227782 (+)
G223545 NA other downstream 214546 1270492 ~ 1270927 (+)
G223694 NA other downstream 993380 2049326 ~ 2104299 (+)
G224953 NA other downstream 2375190 3431136 ~ 3460136 (+)

Expression


Co-expression Network