CI01000052_01044855_01046432


Basic Information

Item Value
gene id CI01000052_01044855_01046432
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000052
NCBI id null
chromosome length 3494004
location 1044855 ~ 1046617 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000052_01044855_01046432.mRNA
TATTGGGAGTGATCATGAAGTCCACTCCATCTCCTCCTCCAGCATTTGTTCGAGTCAGCGAGCGAGACCTGACAGAGATTGAGCTCCATTCGGTCGACTCCATCAATGACCTGCACCGCACACACTCTGAACAGCACAGCAAAGGTATTCAGCCACCCCGTCCACCTCCTCCTTCCACCAACGGGAACCTCCAGATGCAGGATCGGGCAGTTGTCTATCAAACAGGTCAACCAGTGAGAAGGCCCTGTGTGAGCCGACTGAATGACATTTGCACTTCCAATAGGCGACACTATTTCTTAGCATGTGCAGCCATCATTGTGTTCGTCCTTACTCTCATTCTTATCTTCAGTTTTTTAGTCCAGCAGAGCAGTGCTCTCCACACACTTCTAGAGATGGTGAAACAGAAACAGGAAACAGCTGAAGACATCTCGCAACTCTTACAACAGCTGCAAAAGCTGAACATCAACCTCACAGAGCAACGACCATAAGAACATATCACTCGACACAAACACCACTGCACTGTGACCACACTGAGAGAAGAGCACTGTTTATGAGTCTGCTAATGATTGAGAACTTTACATCAATATGTGTGATTCTCTGTCTTAAAGTCTTCTATTACTCTGGTGGAATCCATTAGTCAGTTATCTTGCTCAAAAACATTTACTTGCCCTGT

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000052_01044855_01046432.mRNA True 673 mRNA 0.46 3 1044855 1046617

Neighbor

gene id symbol gene type direction distance location
CI01000052_00906265_00916799 SEMA3B coding upstream 128042 904556 ~ 916813 (+)
CI01000052_00836931_00841228 TMEM51A coding upstream 203422 835368 ~ 841433 (+)
CI01000052_00793472_00831585 KAZNA coding upstream 212902 793472 ~ 831953 (+)
CI01000052_00714377_00725358 ZYMND12 coding upstream 319466 714377 ~ 725389 (+)
CI01000052_00702155_00711896 SLC16A1, MCT1A, SLC16A1A, SLC16A1B coding upstream 332959 702155 ~ 711896 (+)
CI01000052_01143235_01145343 NA coding downstream 96539 1143156 ~ 1147150 (+)
CI01000052_01295531_01298937 NA coding downstream 247577 1294194 ~ 1299203 (+)
CI01000052_01368837_01373810 OPN7C coding downstream 322220 1368837 ~ 1374198 (+)
CI01000052_01383491_01401660 NA coding downstream 335533 1382150 ~ 1402229 (+)
CI01000052_01405500_01408668 TPP1, TAF10 coding downstream 357197 1403814 ~ 1408862 (+)
G223451 NA non-coding upstream 2620 1037267 ~ 1042235 (+)
G223416 NA non-coding upstream 18381 1023389 ~ 1026474 (+)
G223458 NA non-coding upstream 22789 1021766 ~ 1022066 (+)
G223482 NA non-coding upstream 24200 1020169 ~ 1020655 (+)
G223450 NA non-coding upstream 25804 1018631 ~ 1019051 (+)
G223442 NA non-coding downstream 916 1047533 ~ 1048109 (+)
G223461 NA non-coding downstream 2653 1049270 ~ 1050198 (+)
G223485 NA non-coding downstream 4632 1051249 ~ 1051614 (+)
G223429 NA non-coding downstream 5694 1052311 ~ 1053355 (+)
G223456 NA non-coding downstream 8812 1055429 ~ 1055946 (+)
G223545 NA other downstream 223875 1270492 ~ 1270927 (+)
G223694 NA other downstream 1002709 2049326 ~ 2104299 (+)
G224953 NA other downstream 2384519 3431136 ~ 3460136 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location