CI01000053_00733357_00737206


Basic Information

Item Value
gene id CI01000053_00733357_00737206
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 733315 ~ 737327 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000053_00733357_00737206.mRNA
AACAGTCACTTTGAGACGATAAAGGATCTTTAACAGTAAGGATACCTTCAAGATTTTCTCTGGAGTGCTGAGAGTCATTTATTGGTCGTTTTTGGACATTTATGAAGAGCAAATAGCTGACATGGTTCTACTCAGCCTCTTGATTTTGGGTGCGATGGTTCAAGGCCACCTGGCTCTTTCTGGTTCTGACTGTGGAACTTCCTTCAGGCGTCCAGAGTACACCGACATCGCAGTGTATTGTGGGACTGAATCTATAAATTTGGCAATCCAGGTTTGCCCGGTCATTTACACTGGCTATAACGAGTCCTTGTTGATTCTGAATCAAATTGCAAATGATCCGCTGTGTCGAGGAACGCTGGATGCGACTGCGACTCCTCCAGTCGTGCGCTTCAGTTTTCCTCTCAGGCAATTAGACGCCTGCGGCAGCATCTTCCGCACCACCAGCGCTCCAGGGACCGGGGTCTTCTCGGACTTCTCTAACATCCAGACGGTCAACATCAGTGGGGTGGTCAGATCTTTCGACCCCACAACAGGAACAGTGACCTACAACGCCGAGCTGAAGTATTTTTACTCCTGTGCATATCCACTCGAGTACCTGATCAACAATACACAAGTTGATGTGTCATCCTCCTCCATTGCAGTGAAGGACAACAATGGAAGCTTCATCAGCACTTTAAGCATGCAGCTCTTCAAAGATGAAAACTACACTACTCCACTCATTATCCCTTCTATTGGCATTGAGCTCAGAACCAGAATCTATGTGCAAGTCATAGCAGCAAACCTGACTTCACAGTATCATGTTCTACTGGATCGATGCTACGCCTCTATCTCAGCCCTACCCTCCAATTCAACCTTTTTCAATCTGTTTGTCCCGTGCTCGAAGGATCTGTTCACCACCATGTTGGAGAATGGAAACAGTCAGAGGGCTCGCTTCAGCTTCCCAGCCTTCCGCTTTATCGAGCAGCAGAACCAGACCCTTTCCACCTACTACCTCCATTGCATCACCAGGCTTTGTGAAACCAGCACCTGCGCCCAGTTCAAGCAATGCAACGTGAGGGTGAGACGAGACGTACAGACAACGACAATTAAAGATGGTCTCTCAGACACCACTCTCATCACCTCAGGACCTATTAGGACTCAAGCGGACACCCCTCTTACTACTAAGGAACAAGCCCTGAGCAGTGCACAGAAGGACAGTGGTAATGGGGCGTCTGTAGGACTGGGTGTTGCTCTGGCTGTCCTCGTCATTGTGGGCACCGTTGCCGCCCTCATGGCCGTGTCATTTTACCGCAAACTCAGGATGCTACGTTAACTGTCCACGATCCCAGAGCTCTTTTCACGTAGGACAAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000053_00733357_00737206.mRNA True 1354 mRNA 0.49 10 733315 737327

Neighbor

gene id symbol gene type direction distance location
CI01000053_00696659_00703507 NA coding downstream 29808 696362 ~ 703507 (-)
CI01000053_00678066_00685960 DYRK1A coding downstream 45509 677932 ~ 687806 (-)
CI01000053_00667421_00672829 THAP12, PRKRIRB coding downstream 58894 667075 ~ 674421 (-)
CI01000053_00656235_00664346 MAP6B coding downstream 68969 655451 ~ 664346 (-)
CI01000053_00647818_00652652 NA coding downstream 80596 647708 ~ 652719 (-)
CI01000053_00739813_00746803 NA coding upstream 2335 739662 ~ 747031 (-)
CI01000053_00797990_00802827 NA coding upstream 60380 797707 ~ 803060 (-)
CI01000053_00815725_00817893 LIM2.1, LIM2.3 coding upstream 78270 815597 ~ 817893 (-)
CI01000053_00830433_00864331 NA coding upstream 92871 830198 ~ 864373 (-)
CI01000053_00865420_00881846 ROBO3, ROBO2 coding upstream 128046 865373 ~ 881846 (-)
G225622 NA non-coding downstream 162058 571056 ~ 571257 (-)
G225620 NA non-coding downstream 177256 552476 ~ 556059 (-)
G225570 NA non-coding downstream 205785 526117 ~ 527530 (-)
G225571 NA non-coding downstream 207370 524494 ~ 525945 (-)
G225606 NA non-coding downstream 240026 493053 ~ 493289 (-)
G225665 NA non-coding upstream 10054 747381 ~ 747619 (-)
G225668 NA non-coding upstream 11924 749251 ~ 749495 (-)
G225563 NA non-coding upstream 70840 808167 ~ 809734 (-)
G225561 NA non-coding upstream 76301 813628 ~ 814240 (-)
G225678 NA non-coding upstream 79077 816404 ~ 816668 (-)
G225574 NA other downstream 186447 543647 ~ 546868 (-)
G225812 NA other upstream 722268 1459595 ~ 1466732 (-)
CI01000053_02225226_02226481 YPELD, YPEL2B, YPEL1, YPELC, YPEL2 other upstream 1480121 2225210 ~ 2226481 (-)
G226826 NA other upstream 1828565 2565892 ~ 2567072 (-)
G226963 NA other upstream 2259390 2996717 ~ 2997268 (-)
CI01000053_03551506_03551965 NA other upstream 2813006 3550333 ~ 3552847 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_008438 si:ch211-229d2.5 coding NC_007126.7 CM002899.2 19797918 ~ 19803478 (+)