G225144


Basic Information

Item Value
gene id G225144
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 257241 ~ 258204 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU255385
CTTTTTTTCATACCAACACAAGTTAATTGCCATCTTGGAACTTTCTGATAGATGACTACAGGTTCAGGAGTCTCCACTTATAAAAGCAAGAAAACAAAAACATAGTTCAGAAAAACAACAAACTTGTAAGAGACACACAGATATATATATGTTAGCTAAGGAATCTTGAAGAAAACTTGAATTGCAAATTAACAATATTATGTCAATTAAAATTATTGTTATATTGTTGCAATGTTTGTCTTGTTGCTTGGCCGATTAGCTTTAAGCTAATTTACGTATGTAAGCAATAAGGTAGGAGAGGCTGTGCTGTATCGTGAATAAGTCACGATACAGCACTAGCCTCGAGAACCTTATTGCTTTTATAAAATGGTTACCACACAATACAAATATTAAAGCCAGAAATATGTATTAATGCAACTTTCATGAAGTCAACTTTCACTAAAGCCTTCCTTCCGCCAGAAAAAATAGTCCCTGACTGTGAACAGCAACAGAAGTTACATTATTACACCATTAGATTAGGCAAAGACTGTCTTTATGAGTGTGTCAGTCAGTAGCGAAGACTTTTACATTGAAAAGACTGAATTGTTGTGAACACGGAACAAGACGCAACTGACAAATGCTTTGACTAGCGCTGTCAGTCACGGGAAAACCCCTTAAATGTTAAAAGGACAAGATAATACATCGGACATTTAAACAGATTTTTTATTATGAACATAGGACTGACCTGAAGGAAATTGCTAAATCTGAATGCAGGTAATAAACTCGCTCAATCAATCTCTTTCTCACAATACTCTTCTACATAATACAGTAAGCTTCAATGAACAATATCAATTGCGAACATACAGTTTACGCTGCTAAGAGTGGTTGCTAAGGGTGTTGTGTAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU255385 True 887 lncRNA 0.35 2 257241 258204

Neighbor

gene id symbol gene type direction distance location
CI01000053_00190871_00208802 TPST1 coding upstream 48439 190871 ~ 208802 (+)
CI01000053_00146212_00152152 NA coding upstream 104537 145827 ~ 152704 (+)
CI01000053_00133800_00137515 ALDH3A2A coding upstream 119726 133800 ~ 137515 (+)
CI01000053_00088985_00089824 NA coding upstream 167383 86737 ~ 89858 (+)
CI01000053_00064905_00080433 USP2, USP2A, USP2B, USP21 coding upstream 176429 63803 ~ 80812 (+)
CI01000053_00296442_00323444 TIMM50 coding downstream 38238 296442 ~ 323444 (+)
CI01000053_00328885_00333481 DLC coding downstream 70114 328318 ~ 333724 (+)
CI01000053_00373617_00376651 CHP2 coding downstream 115413 373617 ~ 376836 (+)
CI01000053_00385767_00390328 RNASET2L coding downstream 127563 385767 ~ 390328 (+)
CI01000053_00424419_00427247 NA coding downstream 166215 424419 ~ 427249 (+)
G225108 NA non-coding upstream 101339 155530 ~ 155902 (+)
G225103 NA non-coding upstream 147952 109066 ~ 109289 (+)
G225076 NA non-coding upstream 153461 99369 ~ 103780 (+)
G225092 NA non-coding upstream 240285 16610 ~ 16956 (+)
G225173 NA non-coding downstream 109318 367522 ~ 367893 (+)
G225187 NA non-coding downstream 192127 450331 ~ 450769 (+)
G225201 NA non-coding downstream 237143 495347 ~ 495601 (+)
CI01000053_00509280_00523383 NA non-coding downstream 251080 509280 ~ 524344 (+)
G225135 NA non-coding downstream 266287 524491 ~ 525947 (+)
G225952 NA other downstream 1614670 1872874 ~ 1873295 (+)
CI01000053_02594164_02594541 DYNLL6, DYNLL1, DYNLL2A, DYNLL2, BRAFLDRAFT_114344, DYL1, DYNLL1.S, BRAFLDRAFT_130244, DYNLL1.L other downstream 2335023 2592558 ~ 2595467 (+)
G226292 NA other downstream 2778398 3036602 ~ 3046783 (+)
G226347 NA other downstream 3014170 3272374 ~ 3274911 (+)
G226399 NA other downstream 3362594 3620798 ~ 3697529 (+)

Expression


Co-expression Network