Gene
RNA
| Item | Value |
|---|---|
| gene id | G235244 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000054 |
| NCBI id | null |
| chromosome length | 13006764 |
| location | 9302438 ~ 9302704 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU266816 | True | 267 | lncRNA | 0.34 | 1 | 9302438 | 9302704 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000054_09218869_09223868 | NA | coding | downstream | 78319 | 9218632 ~ 9224119 (-) |
| CI01000054_09077309_09080163 | NA | coding | downstream | 221626 | 9076831 ~ 9080812 (-) |
| CI01000054_08953766_08966617 | TMEM57, TMEM57A | coding | downstream | 335821 | 8952134 ~ 8966617 (-) |
| CI01000054_08937312_08942587 | LDLRAP1, LDLRAP1A | coding | downstream | 359851 | 8937312 ~ 8942587 (-) |
| CI01000054_08721571_08723333 | NA | coding | downstream | 578356 | 8721008 ~ 8724208 (-) |
| CI01000054_09453616_09482480 | LPCAT1 | coding | upstream | 149405 | 9452109 ~ 9482723 (-) |
| CI01000054_09483912_09484282 | MRPL36 | coding | upstream | 181108 | 9483147 ~ 9484282 (-) |
| CI01000054_09488559_09488870 | NA | coding | upstream | 185572 | 9488276 ~ 9488870 (-) |
| CI01000054_09495785_09497239 | IRX4B, IRX4 | coding | upstream | 192746 | 9495450 ~ 9497682 (-) |
| CI01000054_09531778_09544007 | NA | coding | upstream | 228806 | 9531510 ~ 9544510 (-) |
| G235239 | NA | non-coding | downstream | 9046 | 9292830 ~ 9293392 (-) |
| G235231 | NA | non-coding | downstream | 25080 | 9277139 ~ 9277358 (-) |
| G235224 | NA | non-coding | downstream | 40635 | 9261593 ~ 9261803 (-) |
| G235223 | NA | non-coding | downstream | 40887 | 9261253 ~ 9261551 (-) |
| G235219 | NA | non-coding | downstream | 53019 | 9249184 ~ 9249419 (-) |
| G235250 | NA | non-coding | upstream | 13828 | 9316532 ~ 9316798 (-) |
| G235298 | NA | non-coding | upstream | 97657 | 9400361 ~ 9400566 (-) |
| G235308 | NA | non-coding | upstream | 134765 | 9437469 ~ 9441851 (-) |
| G235350 | NA | non-coding | upstream | 224144 | 9526848 ~ 9527267 (-) |
| G235368 | NA | non-coding | upstream | 254060 | 9556764 ~ 9559903 (-) |
| G235216 | NA | other | downstream | 53900 | 9248039 ~ 9248538 (-) |
| CI01000054_07165957_07169539 | HEYL | other | downstream | 2130765 | 7165435 ~ 7169539 (-) |
| CI01000054_06629482_06641861 | TRIQK | other | downstream | 2648425 | 6628082 ~ 6642160 (-) |
| G232274 | NA | other | downstream | 4093198 | 5206199 ~ 5209240 (-) |
| CI01000054_04671351_04681181 | PEF1 | other | downstream | 4630205 | 4670151 ~ 4681361 (-) |
| CI01000054_09864693_09866871 | PPP1R11 | other | upstream | 560617 | 9863321 ~ 9867212 (-) |
| CI01000054_10817235_10819181 | TAC1 | other | upstream | 1501167 | 10816015 ~ 10819362 (-) |
| CI01000054_10872970_10881017 | SDHAF3 | other | upstream | 1568400 | 10871104 ~ 10881495 (-) |
| G236748 | NA | other | upstream | 1982490 | 11285194 ~ 11295784 (-) |
