Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_031932 |
| gene name | ecrg4b |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007117.7 |
| NCBI id | CM002890.2 |
| chromosome length | 60270059 |
| location | 15268685 ~ 15300140 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| ecrg4b | Predicted to be involved in several processes, including G1 to G0 transition; anaphase-promoting complex-dependent catabolic process; and cellular senescence. Predicted to be located in apical plasma membrane and cytoplasm. Predicted to be active in extracellular space. Is expressed in ectoderm. Orthologous to human ECRG4 (ECRG4 augurin precursor). |
| id | name | namespace |
|---|---|---|
| GO:0042127 | regulation of cell population proliferation | biological_process |
| GO:0009611 | response to wounding | biological_process |
| GO:0070314 | G1 to G0 transition | biological_process |
| GO:0090398 | cellular senescence | biological_process |
| GO:0008285 | negative regulation of cell population proliferation | biological_process |
| GO:0031145 | anaphase-promoting complex-dependent catabolic process | biological_process |
| GO:0007417 | central nervous system development | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0005615 | extracellular space | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016324 | apical plasma membrane | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-110324-2 | Predicted to be involved in several processes, including G1 to G0 transition; anaphase-promoting complex-dependent catabolic process; and cellular senescence. Predicted to be located in apical plasma membrane and cytoplasm. Predicted to be active in extracellular space. Is expressed in ectoderm. Orthologous to human ECRG4 (ECRG4 augurin precursor). |
| ensembl_id | ENSDARG00000088717 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00062518 | False | 714 | mRNA | 0.43 | 4 | 15268685 | 15300140 |
| TCONS_00062519 | True | 418 | mRNA | 0.48 | 4 | 15268703 | 15299944 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_031931 | si:ch73-23l24.1 | coding | upstream | 9266 | 15250672 ~ 15259419 (+) |
| XLOC_031930 | nck2b | coding | upstream | 22151 | 15145123 ~ 15246534 (+) |
| XLOC_031929 | dph3 | coding | upstream | 137489 | 15127507 ~ 15131196 (+) |
| XLOC_031928 | mrps9 | coding | upstream | 239593 | 14980761 ~ 15029092 (+) |
| XLOC_031927 | pou3f3b | coding | upstream | 311297 | 14949950 ~ 14957388 (+) |
| XLOC_031933 | NA | coding | downstream | 5625 | 15305765 ~ 15308585 (+) |
| XLOC_031934 | tmtops2a | coding | downstream | 73013 | 15373153 ~ 15447996 (+) |
| XLOC_031935 | CR956630.1 | coding | downstream | 243915 | 15544055 ~ 15544170 (+) |
| XLOC_031936 | iqca1 | coding | downstream | 462507 | 15762647 ~ 15893049 (+) |
| XLOC_031937 | CR759882.1 | coding | downstream | 595494 | 15895634 ~ 15902635 (+) |
| XLOC_031925 | dre-mir-153b | non-coding | upstream | 1287593 | 13980945 ~ 13981092 (+) |
| XLOC_031917 | NA | non-coding | upstream | 1920449 | 13344675 ~ 13348236 (+) |
| XLOC_031915 | NA | non-coding | upstream | 2001542 | 13260082 ~ 13267143 (+) |
| XLOC_031897 | AL929243.2 | non-coding | upstream | 3493953 | 11774617 ~ 11774732 (+) |
| XLOC_031889 | BX548046.3 | non-coding | upstream | 4250153 | 11018416 ~ 11018532 (+) |
| XLOC_031938 | CR847983.1 | non-coding | downstream | 638481 | 15938621 ~ 15940105 (+) |
| XLOC_031939 | NA | non-coding | downstream | 690795 | 15990935 ~ 15993964 (+) |
