stk38a (stk38,LOC108265501)


Basic Information

Item Value
gene id stk38a
gene name stk38,LOC108265501
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047602.1
NCBI id CM018548.1
chromosome length 30442583
location 12076511 ~ 12096739 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034306684.1
CCCCAAACTCCCTCTTGTAACTTAAGAGTCAGACTCTTATTTTGGAGACTCGACCTGAAGCAGCGACCCGGAAGAAGGAAATAATGATCAGTGTCTACAAGTAGACTGCATTCAGTCTGAGGTCGAGTAGAAGGTAACCATGGCAATGACGGGTCAGACGTCCTGTTCCTCCATGAGCAACCACACCAAGGAGCGGGTCACGTTGGCCAAAGTGACCCTGGAGAACTTCTACAGCAACCTGATCTCCCAGCACGAGGAGAGGGAGATGAGgcagcaGAAGTTGGAGAAGGTGATGGATCAAGAGGGACTAGCTGATGAAGAGAAGCGTATTCGGCGCTCTCAGCATGCAAGGAAGGAGACAGAGTTTCTGCGGCTCAAACGAACCCGCCTCGGATTGGATGACTTCGAGTCACTCAAAGTGATCGGCCGTGGTGCTTTCGGAGAGGTACGTCTGGTTCAGAAGAAAGACACAGGCCATGTGTATGCCATGAAGATCTTGCGCAAAGCTGATATGCTTGAGAAGGAGCAGGTTGGTCATATACGGGCTGAAAGGGACATTCTGGTGGAGGCGGACAGTCTGTGGGTTGTGAAGATGTTCTACAGCTTTCAGGACAAGATGAACCTCTACCTCATAATGGAGTTCCTACCTGGAGGAGACATGATGACTCTGTTGATGAAGAAGGACACTCTGACTGAGGAGGCTACGCAGTTTTACATCGCTGAGACGGTGCTAGCCATCGACTCCATCCACCAGCTGGGTTTCATCCACAGAGATATTAAACCTGACAACCTGCTACTGGATTCAAAGggCCATGTGAAGCTGTCTGATTTTGGCTTGTGTACGGGCCTTAAGAAGGCTCACAGGACAGAATTCTACAGAAACCTCAACCACAGCCTGCCTAGTGATTTTAcattcCAAAACATGAACTcgaaaagaaaagcagagacATGGAAGAGAAACCGGAGACAGCTGGCCTTCTCCACTGTCGGAACCCCTGACTACATCGCTCCTGAAGTATTTCTGCAGAACGGATACAATAAGCTCTGTGATTGGTGGAGCCTGGGGGTCATCATGTACGAGATGCTTATAGgttaCCCACCTTTCTGCTCAGAGACTCCTCAGGAGACGTACAGGAAGGTGATGAATTGGCGAGAAACGCTGACTTTCCCCCCAGAAGTTCCCATTTCCGAGAAGGCAAAGGATCTTATTCTCAGGTTCTGCTGTGAGAGTGAAAACAGGATTGGTGCTGCTGGAGTTGAAGAGATCAAATCGAATCCTTTCTTTGAAGGGGTGGACTACGACCATATCAGGGAGAGACCTGCTGCCATTCCAATCGAGATTAAAAGCATTGACGACACCTCAAACTTCGACGAGTTTCCAGATTCAGACATCCTCCAACCAACATCGTCTGTAGTGTCCAACCACTGTGAAGCTGATTTAAAGAGCAAAGACTGGGTCTTCATTAACTACACATACAAGCGCTTTGAGGGCCTGACCGCCCGGGGGGCCATTCCCTCCTATATGAAATCAGGGAAGAGATAAACACAGAACCCTGCTGGAGCTTGTGTTTGTCCTTTAAGGAGCCTTTTTTCCATTGCTTCTCATCACTGCGGATTGGTGGACTTCTCCAGACTtgtctgtttcctgttttgggCCACGCTGTGATGCATTCATGGTAGTGGACTCCTCCTCTTCCAGCACTTGTcctacaatgtttttttttttttacccaagcTTCTTTAGTAGAAGCTGCTAAAGCTATTTCTAGTCATCTGTTTTGGCTAGGAATGAAAAATTTGGGGCTAACACCTTTCAAATTCTGTTTTATCCCCATAATAGAGAAATGTTCCTTTTgacttaattaataatttatttagaaGACTAGAATGTGGCCAGTCCACTTTCTACCAGGGATTGCTTTTAGTTAGCGTAATTTACCATCGAAGAATTCTGCTCAGTTATCTGCTGTAGAAATTTGAAGTATACACATtttcagtaaacaaaaataagaaatggaCTCTTTGCAACGTTTTAAAAGTCCAAGAATTTGGACGCATTtgattttttatcttttttttttttttttattattattttttaaatataatctttCACAGTGCTTGCCATCACATACTTCACCTTACAGGAGATGGCAAAATGCAAGAGgcttctctttttgtttatgCAAACAATTTTCAGTGTTTGAAAGCCTAATATAATGTTTGTGAATCTGCCTACAGGGACAAACATTGCCTTAAATTTGGATACTAGACGAATGTTCCAGTAATCACTCGTTACACCAGCAAAATGTCCCTCTTCTAGACCTGCACACTGAAACAAAgttttttcctctgtttattttctttacagtaTACCAGCCAGTGATAATGACCAAGTGACATTTTGTAGACCAGCTTATTTATCGTGATTCTTTCAACTGCAGCTGTAGCTTTACCTTGTAATTTTACATTTGCTGGATGTTCATGCTCGCACTAAATTTGAAGCTGTTTTCCTTAAAAGGGCTCGCTTGTTCATGTTTACCTTGTTCAGTTTGGGAACAGAGCATGAGTCGGATGAGCGTTGCGGTTCAGTGTGctgaatttgtttatttggttATATACTCGGCAGTCTTCCATGTTGATACTGGGCTGAAAAAGCATGTTAATAGAAAAGCAATATTTTACCAAAGACTTGTTACTTTTAGCAGCTGATGCACCCTTGTTATGCCTTCAAGAAGCTTGATTTGTACTCGAAATTGAGTTTTCTACCTTGTAGGTTAGCGCATCTTGTAGAGTAGTGGCGAAAAAAATAGACTAGTAAAATTATTTATCCTGGGACAGTAGCTGTCTATTGTCATCATTCCAGTATGGCTAGTAGTAGTTGCACTATTGTATAGATAACTCGCGCATCGTGAAATAAGGAACGTTTGAGGGAGTCCGCAAACATTGTATGACTCGGATAGGTCTTGCTCGGTCGGATTTCAATAGGTTCCTTCATCAGCATCATGTTAGAACGGAATCCTGTTCTCGAGAAGCTCAGCTTTTTGCGTCTTTACACTGTCCTGCTGTTGCAGGTAATGCTAATCAAATCTAGATTTAGCTTCGACTCAGCTGGACTCGAAGAACAGATCCTATTAGAGGTAATTGTACTTTCGGTCAGAACGCCTAGCACTATTCTGCTCGATTGTGACTATTGATTTGTTCCATCTGACTGGAGCAGGACGCAGTAAGTTTTCTTGTTTTGCAATACAAAATGCTGTCGGTTAAGTCAATAACTATCCGCATGGCCTCACGAATCCAAAAATGCTGTTGACGAAAAGAAAAAGCACGATTGTGAGATTTTCCAAAATGCTgtagtttttatatttcaggAGCTGTACAAGGGAGCACTGCGTTTTGTAAATTAGAGCATTATTTCACTGATCCCGTAATGGGTCCGTTCTGCTCGCATACTTTTGCATGAGTGCTGCTGGAATGTTGGATGATGATCTGAATGGCACGGAGTAAGTGTTTCATTACTTTTAAACTCTATTCTTCTTctattgttgtgtgtttggcCCTCTGTTCCAGCACTGCGCAGTTTATTACTTATGAATGAAGCATTCCTTCTCATAAACAGTTTGTCAGTGAGAACATGCTTGATCAAATTATACACATAACACCCATTTGACTGCtagaactgtttttaaaaaaaaa
>XM_034306685.1
GAGGTCGAGTAGAAGGTAAGCTGTTAAAAGTTGTCCGGATAGCAGCTAAGAAGTGGATGATGAAGTAACCATGGCAATGACGGGTCAGACGTCCTGTTCCTCCATGAGCAACCACACCAAGGAGCGGGTCACGTTGGCCAAAGTGACCCTGGAGAACTTCTACAGCAACCTGATCTCCCAGCACGAGGAGAGGGAGATGAGgcagcaGAAGTTGGAGAAGGTGATGGATCAAGAGGGACTAGCTGATGAAGAGAAGCGTATTCGGCGCTCTCAGCATGCAAGGAAGGAGACAGAGTTTCTGCGGCTCAAACGAACCCGCCTCGGATTGGATGACTTCGAGTCACTCAAAGTGATCGGCCGTGGTGCTTTCGGAGAGGTACGTCTGGTTCAGAAGAAAGACACAGGCCATGTGTATGCCATGAAGATCTTGCGCAAAGCTGATATGCTTGAGAAGGAGCAGGTTGGTCATATACGGGCTGAAAGGGACATTCTGGTGGAGGCGGACAGTCTGTGGGTTGTGAAGATGTTCTACAGCTTTCAGGACAAGATGAACCTCTACCTCATAATGGAGTTCCTACCTGGAGGAGACATGATGACTCTGTTGATGAAGAAGGACACTCTGACTGAGGAGGCTACGCAGTTTTACATCGCTGAGACGGTGCTAGCCATCGACTCCATCCACCAGCTGGGTTTCATCCACAGAGATATTAAACCTGACAACCTGCTACTGGATTCAAAGggCCATGTGAAGCTGTCTGATTTTGGCTTGTGTACGGGCCTTAAGAAGGCTCACAGGACAGAATTCTACAGAAACCTCAACCACAGCCTGCCTAGTGATTTTAcattcCAAAACATGAACTcgaaaagaaaagcagagacATGGAAGAGAAACCGGAGACAGCTGGCCTTCTCCACTGTCGGAACCCCTGACTACATCGCTCCTGAAGTATTTCTGCAGAACGGATACAATAAGCTCTGTGATTGGTGGAGCCTGGGGGTCATCATGTACGAGATGCTTATAGgttaCCCACCTTTCTGCTCAGAGACTCCTCAGGAGACGTACAGGAAGGTGATGAATTGGCGAGAAACGCTGACTTTCCCCCCAGAAGTTCCCATTTCCGAGAAGGCAAAGGATCTTATTCTCAGGTTCTGCTGTGAGAGTGAAAACAGGATTGGTGCTGCTGGAGTTGAAGAGATCAAATCGAATCCTTTCTTTGAAGGGGTGGACTACGACCATATCAGGGAGAGACCTGCTGCCATTCCAATCGAGATTAAAAGCATTGACGACACCTCAAACTTCGACGAGTTTCCAGATTCAGACATCCTCCAACCAACATCGTCTGTAGTGTCCAACCACTGTGAAGCTGATTTAAAGAGCAAAGACTGGGTCTTCATTAACTACACATACAAGCGCTTTGAGGGCCTGACCGCCCGGGGGGCCATTCCCTCCTATATGAAATCAGGGAAGAGATAAACACAGAACCCTGCTGGAGCTTGTGTTTGTCCTTTAAGGAGCCTTTTTTCCATTGCTTCTCATCACTGCGGATTGGTGGACTTCTCCAGACTtgtctgtttcctgttttgggCCACGCTGTGATGCATTCATGGTAGTGGACTCCTCCTCTTCCAGCACTTGTcctacaatgtttttttttttttacccaagcTTCTTTAGTAGAAGCTGCTAAAGCTATTTCTAGTCATCTGTTTTGGCTAGGAATGAAAAATTTGGGGCTAACACCTTTCAAATTCTGTTTTATCCCCATAATAGAGAAATGTTCCTTTTgacttaattaataatttatttagaaGACTAGAATGTGGCCAGTCCACTTTCTACCAGGGATTGCTTTTAGTTAGCGTAATTTACCATCGAAGAATTCTGCTCAGTTATCTGCTGTAGAAATTTGAAGTATACACATtttcagtaaacaaaaataagaaatggaCTCTTTGCAACGTTTTAAAAGTCCAAGAATTTGGACGCATTtgattttttatcttttttttttttttttattattattttttaaatataatctttCACAGTGCTTGCCATCACATACTTCACCTTACAGGAGATGGCAAAATGCAAGAGgcttctctttttgtttatgCAAACAATTTTCAGTGTTTGAAAGCCTAATATAATGTTTGTGAATCTGCCTACAGGGACAAACATTGCCTTAAATTTGGATACTAGACGAATGTTCCAGTAATCACTCGTTACACCAGCAAAATGTCCCTCTTCTAGACCTGCACACTGAAACAAAgttttttcctctgtttattttctttacagtaTACCAGCCAGTGATAATGACCAAGTGACATTTTGTAGACCAGCTTATTTATCGTGATTCTTTCAACTGCAGCTGTAGCTTTACCTTGTAATTTTACATTTGCTGGATGTTCATGCTCGCACTAAATTTGAAGCTGTTTTCCTTAAAAGGGCTCGCTTGTTCATGTTTACCTTGTTCAGTTTGGGAACAGAGCATGAGTCGGATGAGCGTTGCGGTTCAGTGTGctgaatttgtttatttggttATATACTCGGCAGTCTTCCATGTTGATACTGGGCTGAAAAAGCATGTTAATAGAAAAGCAATATTTTACCAAAGACTTGTTACTTTTAGCAGCTGATGCACCCTTGTTATGCCTTCAAGAAGCTTGATTTGTACTCGAAATTGAGTTTTCTACCTTGTAGGTTAGCGCATCTTGTAGAGTAGTGGCGAAAAAAATAGACTAGTAAAATTATTTATCCTGGGACAGTAGCTGTCTATTGTCATCATTCCAGTATGGCTAGTAGTAGTTGCACTATTGTATAGATAACTCGCGCATCGTGAAATAAGGAACGTTTGAGGGAGTCCGCAAACATTGTATGACTCGGATAGGTCTTGCTCGGTCGGATTTCAATAGGTTCCTTCATCAGCATCATGTTAGAACGGAATCCTGTTCTCGAGAAGCTCAGCTTTTTGCGTCTTTACACTGTCCTGCTGTTGCAGGTAATGCTAATCAAATCTAGATTTAGCTTCGACTCAGCTGGACTCGAAGAACAGATCCTATTAGAGGTAATTGTACTTTCGGTCAGAACGCCTAGCACTATTCTGCTCGATTGTGACTATTGATTTGTTCCATCTGACTGGAGCAGGACGCAGTAAGTTTTCTTGTTTTGCAATACAAAATGCTGTCGGTTAAGTCAATAACTATCCGCATGGCCTCACGAATCCAAAAATGCTGTTGACGAAAAGAAAAAGCACGATTGTGAGATTTTCCAAAATGCTgtagtttttatatttcaggAGCTGTACAAGGGAGCACTGCGTTTTGTAAATTAGAGCATTATTTCACTGATCCCGTAATGGGTCCGTTCTGCTCGCATACTTTTGCATGAGTGCTGCTGGAATGTTGGATGATGATCTGAATGGCACGGAGTAAGTGTTTCATTACTTTTAAACTCTATTCTTCTTctattgttgtgtgtttggcCCTCTGTTCCAGCACTGCGCAGTTTATTACTTATGAATGAAGCATTCCTTCTCATAAACAGTTTGTCAGTGAGAACATGCTTGATCAAATTATACACATAACACCCATTTGACTGCtagaactgtttttaaaaaaaaa

Function

symbol description
stk38 Enables several functions, including ATP binding activity; magnesium ion binding activity; and mitogen-activated protein kinase kinase kinase binding activity. Involved in intracellular signal transduction; negative regulation of MAP kinase activity; and protein phosphorylation. Located in cytosol and nucleus.

NR:

description
PREDICTED: serine/threonine-protein kinase 38

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08790 STK38, NDR; serine/threonine kinase 38

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034306684.1 True 3696 mRNA 0.43 14 12076511 12096739
XM_034306685.1 False 3627 mRNA 0.43 14 12076629 12096739

Neighbor

gene id symbol gene type direction distance location
sema3ga sema3ga,LOC108265594,LOC108442245,LOC107591802,LOC107550503,LOC107731285,LOC107669661 coding upstream 43019 12010073 ~ 12033492 (+)
tspy LOC108265788 coding upstream 75741 11996043 ~ 12000770 (+)
suv39h1b suv39h1,suv39h1b,LOC108265881,LOC108442234,LOC107550505,LOC107679310,LOC107591797 coding upstream 119108 11947451 ~ 11957403 (+)
taf10 taf10,LOC106572212,LOC107679390,LOC107711978,LOC107591795,LOC107550511,LOC107707678 coding upstream 166507 11906748 ~ 11910004 (+)
efhd2 efhd2,LOC107711975,LOC107591793 coding upstream 172254 11882246 ~ 11904257 (+)
prex1 prex1,LOC107731191,LOC107591805,LOC107679267,LOC107550458 coding downstream 6481 12103220 ~ 12187629 (+)
atp5pb atp5f1,LOC107668113,LOC107679218,LOC107711984,LOC107731279 coding downstream 152770 12249509 ~ 12257259 (+)
eps8l3b LOC108265744 coding downstream 160837 12257576 ~ 12274064 (+)
gnat2 gnat2,LOC108265815,LOC108442114,LOC102236489,LOC108236782,LOC107390790,LOC107591823,LOC103467179,LOC107679180,LOC106946560,LOC107731158,LOC107668040,LOC107550493 coding downstream 218165 12314904 ~ 12322876 (+)
trnad-guc_1 NA coding downstream 285260 12381999 ~ 12382070 (+)
G131061 NA non-coding upstream 358626 11716832 ~ 11717885 (+)
G130960 NA non-coding upstream 524480 11548962 ~ 11552031 (+)
LOC117597850 NA non-coding upstream 717131 11355449 ~ 11359380 (+)
LOC113527270 NA non-coding upstream 1128165 10944657 ~ 10948346 (+)
G130618 NA non-coding upstream 1159886 10916337 ~ 10916625 (+)
G131279 NA non-coding downstream 120265 12217004 ~ 12217214 (+)
G131282 NA non-coding downstream 129413 12226152 ~ 12226362 (+)
LOC117597859 NA non-coding downstream 423155 12519894 ~ 12533258 (+)
G131606 NA non-coding downstream 593428 12690167 ~ 12712485 (+)
LOC117597872 NA non-coding downstream 603973 12700712 ~ 12701501 (+)
foxp3a LOC108265789 other upstream 80659 11979186 ~ 11995852 (+)
porcn porcn,LOC108265120,LOC108441640,LOC107668076,LOC107585894,LOC107745789 other upstream 362479 11705547 ~ 11714032 (+)
uck2a uck2,uck2a,LOC108441637,LOC107731246,LOC107668082,LOC107745792,LOC107585889,LOC106584056,LOC107549113,LOC107695269 other upstream 379720 11677511 ~ 11696791 (+)
LOC113530800 LOC108266038 other upstream 442667 11622302 ~ 11633844 (+)
mrpl55 mrpl55 other upstream 1202385 10870119 ~ 10874126 (+)
kcnq2a LOC108265949,LOC108442249,LOC107668096,LOC107550457,LOC107711924,LOC107731192,LOC107679259 other downstream 99854 12196593 ~ 12230001 (+)
rbm15 rbm15,LOC107731203 other downstream 502959 12599698 ~ 12604705 (+)
LOC113527348 LOC108266008,LOC108437580,LOC107731173,LOC107549994,LOC107745767 other downstream 1608427 13705166 ~ 13791317 (+)
dock8 dock8 other downstream 1793665 13890404 ~ 13948808 (+)
aopep c5h9orf3,cunh9orf3 other downstream 1853198 13949937 ~ 14022687 (+)

Expression


Co-expression Network