AMCG00001101


Basic Information

Item Value
gene id AMCG00001101
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 15261751 ~ 15264010 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001101
atgtgtggaatctGTTGTGTTGTGAACTTGTCCTCCTCACAGTCGGCACTGGAGAAAACCCTGATTCGGAACCTGAAGAAGAGAGGACCCAGCTGTAGTCAAGAAGTAACCAAAACGGCAACTGATTTGAGCTACAGCTGTGTTTTCTCTGGCCATGTCCTTCATTTGAGAGGTAGCCTAACTCCTCAGCCATTGCAAGATGAGGCTGGGAACCTCTTCCTTTGGAACGGGGAAGTCTTCGGTGGCCTGGCGGTGAGAAGTGGAGAAAACGATACACAAGTTGTTTTCCAGattctttcaaaatgtgtcCGTGATGCAGATATCCTGTCTACTCTGTCATCTATTCAAGGACCCTGGGCTTTCATGTTTTACCAGGCAGACAGTCATTGCCTGTGGTTTGGCAGAGACTTCTTTGGCCGACGAAGTCTTCTCTGGCAGTGCGACGATGGAGGGAAGTCGGTTACTCTTACTTCTGTGGCTGCTTTAAAACCTGCAGCTGAGCACACAGAGTGGCAGGAAGTACCAGCTATTGGAGTTTATAAGCTTGATTTGAGGGCTGTTTCTCTGTTGGGATGTTTAGTTTTAGAGGTTTATCCTTGGAAATATTCTTGCCAACTAAGCTTAAACCATGACCTGAAATGGGAGGGCTTGTCCAACTGTGTGTCTTTAGTAATGAATGAATCTGATCTTTTCCTAACCGCTCCAGTTGTTCCCTTAAACGATACCATCCCAGAGACTCAGCCCGAGTTGCAGCATATGTTTAGTGCCCAGCCATCTTTTCAAGATCTCGATGTGTTATTGGAGAATGACGAAAAGAAGATACTAGCTTGCCAGCTTATAGATGTGTTAAGTGAGGCAGTGAGGCGGCGTGTCCAGAGCCTTCCTAGTGCATCCCTGTCGGAGTCTTCCAGTGACGGAGCAGATATTGCCATTCTGTTTTCTGGTGGTATCGACTCAATGATTCTTGCGATTTTAGCTGACCATCATATCCCTGGAGAAAAGCCAATTGATCTTTTGAATGTGGCTTTCCAATTGCAGGAACCGAAGAAGCAGAAGCAATctaccaaaaaactaaataaggaTAAGGACTGTGAAAAAGCCAAGGTTGATTCTGCTGAATGCAGTCAATCTGTATGTTTTGATGTGCCCGACAGAATTACTGGCAGGGCTGGCTTAAAAGAGCTACAGGCAATAAACCCGACGCGGAGGTGGAATTTTGTGGAAATCAATATTGTAAAGGAGGAACTTCAAGAaatgagacacaaacacatcagTCATTTGGTACATCCATTAGACACAGTGCTAGATGACAGTATCGGCTGTGCGGTGTGGTTTGCTTCAAGAGGAATTGGTTTTGCAGTAGAGGGCACGGACCGGCGACCATATACATCAACTGCAAAGGTAGTGCTCACTGGAATTGGTGCGGATGAGCAGCTAGCTGGGTACTCCCGCCATCGTGTTCGCTTTAAAACCTCAGGCCTGGAAGGGCTGGTCCAAGAGCTGGGGATGGAGCTGGGCAGGATCTCTTCACGGAATCTCGGCAGGGATGACCGGATCATCGGAGATCATGGGAAGGAAGCAAGGCAAGTGTTCCCGTTCCTGGATGAAGAGGTGGTGAGTTTCTTGAATGCTGTGCCAGTGTGGGCCAAAGCAGACCTGTCCTTGCCACGGGGACTGGGGGAGAAGCTGCTCCTCCGCCTGGCTGCCAGGGAACTGGGCCTTGCCGCTGCCGCCACGCTGCCCAAGAGAGCCATGCAGTTCGGCTCCAGGATCGCCAAAATGGAGAACCGCAGTGAGAAGGCCTCTGACAGATGCAACAGACTCCATGTTTCTTAA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001101 True 1836 mRNA 0.49 3 15261751 15264010

Neighbor

gene id symbol gene type direction distance location
AMCG00001102 NA coding upstream 20661 15229871 ~ 15241090 (+)
AMCG00001094 calcrl,LOC103374150,LOC105905912,LOC104930425 coding upstream 190780 15061001 ~ 15070971 (+)
AMCG00001095 NA coding upstream 226170 14998017 ~ 15035581 (+)
AMCG00001087 LOC106581929,LOC108435067 coding upstream 533564 14696640 ~ 14728187 (+)
AMCG00001086 NA coding upstream 637900 14619523 ~ 14623851 (+)
AMCG00001103 NA coding downstream 5242 15269252 ~ 15283103 (+)
AMCG00001108 NA coding downstream 31094 15295104 ~ 15318438 (+)
AMCG00001109 NA coding downstream 54940 15318950 ~ 15323639 (+)
AMCG00001112 NA coding downstream 87075 15351085 ~ 15351360 (+)
AMCG00001113 cnot9,LOC103363318,LOC106575212,LOC106574282,LOC105022524 coding downstream 211814 15475824 ~ 15481816 (+)
G128747 NA non-coding upstream 50426 15210353 ~ 15211325 (+)
G128697 NA non-coding upstream 187849 15071073 ~ 15073902 (+)
G128663 NA non-coding upstream 482310 14776859 ~ 14779441 (+)
G128662 NA non-coding upstream 485028 14773618 ~ 14776723 (+)
G128402 NA non-coding upstream 1176821 14084286 ~ 14084930 (+)
G128772 NA non-coding downstream 61984 15325994 ~ 15326220 (+)
G128815 NA non-coding downstream 94633 15358643 ~ 15359014 (+)
G128827 NA non-coding downstream 148770 15412780 ~ 15413107 (+)
G128919 NA non-coding downstream 302391 15566401 ~ 15886602 (+)
G128928 NA non-coding downstream 617345 15881355 ~ 15882299 (+)
AMCG00001098 NA other upstream 77359 15150275 ~ 15184392 (+)
AMCG00001022 NA other upstream 2876709 12288950 ~ 12385042 (+)
AMCG00001002 myo3b other upstream 3250326 11999664 ~ 12011425 (+)
AMCG00000949 NA other upstream 5107564 10100283 ~ 10154187 (+)
G127134 NA other upstream 6641556 8617199 ~ 8620195 (+)
G128823 NA other downstream 145102 15409112 ~ 15420880 (+)
AMCG00001114 NA other downstream 196522 15460532 ~ 15463853 (+)
G129365 zgc:162707,LOC107749877,LOC107592986,LOC107668408,LOC107596553 other downstream 2759050 18023060 ~ 18044251 (+)
G129453 NA other downstream 3281883 18545893 ~ 18547915 (+)
G129442 NA other downstream 3291141 18555151 ~ 18558174 (+)

Expression


Co-expression Network