G128294


Basic Information

Item Value
gene id G128294
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 13461666 ~ 13463482 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU160870
AAAAACtctaatattttaaacagctttGTACAGTATGCATGGTGACATTTCTTACCTTGCCAGTAAAAGCTACCAGGGCCCCCAACAACAACTCGGTTATTCTGCTACAAAATATAGAAGAAAAAGGTAAAGtgtctttcaaatatatttcagtgcatcctttaatgatttaaatttaaacatgtacattCCCTAACCTTCACATTATTGCTGAACTGCTGAAATAATACTTTGGTACTGGGATGGAATCATTTTGATAtgcttaaaacaaacagaaaacatgtttatgGTCATAGCTATAACAAAAGTATGTTTAAATAAGGGGCAGTCTTTTTAATTCAAAGTCTCTTATCTTGAAACATTACATACCTTTACAAAGTCAGCGCTGAAACCTGCCTGGCAAAAGCCTTGCCCATCTGGGTTGTTTTTAGCtggaaatatatacacacacaaattatgaatacataatacatgttaATGAATAATCTGGTAAAAGTCTAACACATACTATTGTATGTTGGCCAAATCAGAAAACTATGATTCTTGTGACACATATAGTttggataaaataataataaaatggttgATTTAGTCTCTTCTGAGCCCGGATTTTCAAGGGCCAGTGAGAGCTCACCGGACGCCGCCGGAACCGCGACAAGGCGTGGGCCCCTCTCTCGGGGCGAACCCATTCCAGGGCGCCCTGCCCTTCACAAAGAAAAGAGAACTCTCCCTGGGGCTCCCGCCGGCTTCTCCGGGATCGGTACCCTATTTTGACTA

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160870 True 777 lncRNA 0.39 2 13461666 13463482

Neighbor

gene id symbol gene type direction distance location
AMCG00001063 osbpl6 coding upstream 28566 13404815 ~ 13433100 (+)
AMCG00001062 rbm45 coding upstream 90373 13363537 ~ 13371293 (+)
AMCG00001055 agps coding upstream 180936 13238223 ~ 13280730 (+)
AMCG00001057 hnrnpa3,LOC107600707 coding upstream 249820 13201474 ~ 13211846 (+)
AMCG00001054 mtx2,LOC107740585 coding upstream 365794 13076920 ~ 13095872 (+)
AMCG00001067 NA coding downstream 51202 13514684 ~ 13519469 (+)
AMCG00001070 NA coding downstream 311093 13774575 ~ 13785857 (+)
AMCG00001075 NA coding downstream 382917 13846399 ~ 13848862 (+)
AMCG00001074 pde1a coding downstream 461970 13925452 ~ 13935840 (+)
AMCG00001079 neurod1,ndf1 coding downstream 542825 14006307 ~ 14007332 (+)
G128255 NA non-coding upstream 79022 13357491 ~ 13382644 (+)
G128171 atp5g3,atp5g2,LOC101062993,LOC105908030 non-coding upstream 620658 12837651 ~ 12841008 (+)
G128107 ola1,LOC107660044 non-coding upstream 785492 12638985 ~ 12676174 (+)
G128101 NA non-coding upstream 806494 12606039 ~ 12655172 (+)
G128074 LOC103479331,LOC106632289,LOC101486364 non-coding upstream 921348 12540081 ~ 12540318 (+)
G128402 NA non-coding downstream 620804 14084286 ~ 14084930 (+)
G128662 NA non-coding downstream 1310136 14773618 ~ 14776723 (+)
G128663 NA non-coding downstream 1313377 14776859 ~ 14779441 (+)
G128697 NA non-coding downstream 1607591 15071073 ~ 15073902 (+)
G128747 NA non-coding downstream 1746871 15210353 ~ 15211325 (+)
AMCG00001022 NA other upstream 1076624 12288950 ~ 12385042 (+)
AMCG00001002 myo3b other upstream 1450241 11999664 ~ 12011425 (+)
AMCG00000949 NA other upstream 3307479 10100283 ~ 10154187 (+)
G127134 NA other upstream 4841471 8617199 ~ 8620195 (+)
AMCG00000848 NA other upstream 7995685 5461301 ~ 5465981 (+)
AMCG00001098 NA other downstream 1686793 15150275 ~ 15184392 (+)
G128823 NA other downstream 1945630 15409112 ~ 15420880 (+)
AMCG00001114 NA other downstream 1997050 15460532 ~ 15463853 (+)
G129365 zgc:162707,LOC107749877,LOC107592986,LOC107668408,LOC107596553 other downstream 4559578 18023060 ~ 18044251 (+)
G129453 NA other downstream 5082411 18545893 ~ 18547915 (+)

Expression


Co-expression Network