AMCG00021431


Basic Information

Item Value
gene id AMCG00021431
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 17241682 ~ 17250316 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021431
ATGGGCTCCCCCAGCcccagagaggaggagggtgaACGGCTGACCCAGGAGGAGGCTGCCCTACCCGTCCACACCTTCGAGCAGATACTGGACATCATCGGCCACTTTGGGAAATACCAGAAGCTGATGTACATTGCCCTGTGTTTTGTGGCTTTCACCTCTGCCTGGCCTGAGGAGTGGGACAGTGCTGATCCCCCCAAACATGGCTGGAATCAATCTGTGGTGTCCTGTCAGGCTTGGGAATATGACACATCAGTCTTCTCCAGTACGGTTGTGACAGAGTGGGACCTGGTGTGTGAGCGCAGCTGGATGAGGCAGCTGGACACGGTGCTGTTTATGCTGGGATGTTTAGTTGGGTCAAGTCCAGTGGGCTGGGTGGCAGACAGgtatGGCCGTAGGAAGGTGGTCTTGGTGAGTGCAGCTCTCGCCATTCTGTGCACtctggggatggtgttctctcCAGCCTTCTGGTTCTTCACTGTCCTGAGGTTCCTGAATGGCTTGCTGTCTCTGGCACTGTACAATGTGTCTTACACACTGGGGATGGAGTTTGTTGGACCAACGAAGAAGAAGGTGCCAGGAATGATCATGAACCTGGCCTTCACATTGGGCCACGTGCTGCTGACAGGGGTGGCATACGGGTCGGGCAGCTGGAGGATGATCCAGCTGACCGTGACCCTGGTGTCAGCAGGTGTAATGCTCTGCTGCTGGTTCCTGCCCGAGTCTGCACGCTGGCTCATCCTACGGGACCGGGAAGAAGAAGCCAAGGCTTGGAGATTAGACCAGAGGAAGTACACAGCTACTGATTTACTGAGGACACCAATACTGCGCCGCAACACCCTCATCCTATGCTACAACTGGTTTTCTGTGTGCTGCTCCTACTACGGCCTCGTCTACAACATCCAGAACCTGTCCGGGGACCCTTACGTCAACTTCCTGTTGATCGGGCTGGCTGAAGTTCCAGCGCATATCGGCCTCCTGCTGATTCTGGACCGGACCCGCAGGAAACTGCTGCTCCTGGGCACACAGCTGCTGGGCGCGGGCGCCTGTCTGGGCGCGGCAGCCTTCGCTTGGCTAGAGATGGCATGGCTGACAGTGGGACTCTGCCTGGTCGGACAGTTCCTGATCTCTGCAGCTTTCACCGGTGTCTACCTCTACTCTGCGGAAGTGATGCCAACCCCTCTCAGCACCATTTCCACCCAGAGCTCTCCACGCTCAGCCTTGAGCAGGACCAACCCTCCTGAACTACTGAGCTATGtcTCCGAGATCAGGACACTAGAGGCTGGGATGGGCCACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021431 True 1299 mRNA 0.57 11 17241682 17250316

Neighbor

gene id symbol gene type direction distance location
AMCG00021433 pou3f4,LOC108266720 coding upstream 14754 17225840 ~ 17226928 (+)
AMCG00021430 NA coding upstream 144303 17082739 ~ 17097379 (+)
AMCG00021429 NA coding upstream 161165 17072351 ~ 17080517 (+)
AMCG00021423 NA coding upstream 170552 17066613 ~ 17071130 (+)
AMCG00021424 sh3bgrl coding upstream 178473 17047613 ~ 17063209 (+)
AMCG00021434 NA coding downstream 89100 17339416 ~ 17364818 (+)
AMCG00021438 LOC108430901,LOC105026965,LOC106603324 coding downstream 121166 17371482 ~ 17399636 (+)
AMCG00021436 NA coding downstream 153702 17404018 ~ 17419822 (+)
AMCG00021443 NA coding downstream 177201 17427517 ~ 17428203 (+)
AMCG00021442 NA coding downstream 180150 17430466 ~ 17436598 (+)
G85903 NA non-coding upstream 153888 17086752 ~ 17087794 (+)
G85876 NA non-coding upstream 199107 17036572 ~ 17042575 (+)
G85823 NA non-coding upstream 432368 16807806 ~ 16809314 (+)
G85784 NA non-coding upstream 591834 16647139 ~ 16649848 (+)
G85766 NA non-coding upstream 644780 16596201 ~ 16596902 (+)
G85941 NA non-coding downstream 47843 17298159 ~ 17298813 (+)
G85976 NA non-coding downstream 209177 17459493 ~ 17459941 (+)
G85992 NA non-coding downstream 257210 17507526 ~ 17509083 (+)
G85993 NA non-coding downstream 258769 17509085 ~ 17509295 (+)
G85999 NA non-coding downstream 262812 17513128 ~ 17513621 (+)
G85869 NA other upstream 237551 16997877 ~ 17004131 (+)
G85787 NA other upstream 527644 16656644 ~ 16714038 (+)
G85764 LOC103366846,LOC106930986 other upstream 648709 16590181 ~ 16592973 (+)
AMCG00021373 ubl3b,LOC107658069,LOC107707244,LOC108432919,LOC101472018,LOC107092570,LOC105029324,LOC100692344,LOC103390851 other upstream 1168061 16063499 ~ 16073621 (+)
AMCG00021349 mmgt1,tmm32,LOC107658091,LOC107560676,LOC102787804 other upstream 1809318 15428477 ~ 15432364 (+)
AMCG00021441 NA other downstream 220009 17470325 ~ 17473396 (+)
G86121 NA other downstream 998174 18248490 ~ 18249686 (+)
AMCG00021472 NA other downstream 1796733 19047049 ~ 19055103 (+)
AMCG00021485 NA other downstream 2029449 19279765 ~ 19294779 (+)
G86407 NA other downstream 2249484 19499800 ~ 19501242 (+)

Expression


Co-expression Network