G83221


Basic Information

Item Value
gene id G83221
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 1346451 ~ 1346771 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU103850
ttctgggctccacacttcaagaaagatatcgctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaatgtcctactgagagactgaggacctgaaccttttcaccctggaacagaggagactacgtggggacttgatccaagtcttcaaaatcatgaaaggcatcgaccgcatcaaaccagaggagcttttccagatcagcagggacacacgcacccggggacacaaatggaaattgggcttcaaggcattcaagacagaaaacaggagacacttcttcacacagagaggcgtcacaatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU103850 True 321 lncRNA 0.50 1 1346451 1346771

Neighbor

gene id symbol gene type direction distance location
AMCG00021052 NA coding upstream 294269 1045175 ~ 1052182 (+)
AMCG00021050 stag2,LOC107561283,LOC107600152 coding upstream 448571 879806 ~ 897880 (+)
AMCG00021047 NA coding upstream 489981 849545 ~ 856470 (+)
AMCG00021045 NA coding upstream 589712 749408 ~ 756739 (+)
AMCG00021046 gria3,LOC105893193 coding upstream 609466 717627 ~ 736985 (+)
AMCG00021058 NA coding downstream 362562 1709333 ~ 1739006 (+)
AMCG00021062 NA coding downstream 619041 1965812 ~ 1973074 (+)
AMCG00021071 tcp1,LOC107549176 coding downstream 695053 2041824 ~ 2048003 (+)
AMCG00021070 zc3h12b,LOC106567790,LOC106603314 coding downstream 730653 2077424 ~ 2081654 (+)
AMCG00021074 msn,msna,moes,LOC106567791 coding downstream 767660 2114431 ~ 2145920 (+)
G83153 NA non-coding upstream 563795 777159 ~ 782656 (+)
G83114 NA non-coding upstream 1060319 285921 ~ 286132 (+)
G83086 NA non-coding upstream 1101132 243756 ~ 245319 (+)
G83325 NA non-coding downstream 736343 2083114 ~ 2083451 (+)
G83338 NA non-coding downstream 758411 2105182 ~ 2106906 (+)
G83374 NA non-coding downstream 854523 2201294 ~ 2201559 (+)
G83397 NA non-coding downstream 932025 2278796 ~ 2293041 (+)
G83427 NA non-coding downstream 1169488 2516259 ~ 2516915 (+)
AMCG00021049 NA other upstream 419976 918006 ~ 926475 (+)
AMCG00021063 NA other downstream 570717 1917488 ~ 1919366 (+)
AMCG00021076 NA other downstream 862711 2209482 ~ 2230147 (+)
G83624 NA other downstream 2451070 3797841 ~ 3798783 (+)
AMCG00021113 vma21,LOC107565438,LOC107741184,LOC107680358,LOC108442053 other downstream 2780299 4127070 ~ 4129373 (+)
AMCG00021114 NA other downstream 2855940 4202711 ~ 4233797 (+)

Expression


Co-expression Network