AMCG00021052


Basic Information

Item Value
gene id AMCG00021052
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 1045175 ~ 1052182 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021052
ATGCCCACACACTTTGGCTCCCCTGCACAGAAAGTTTTAGACTTTCACAAGCGCGAGGGCACGGACGAGCTCAAGCTCCCCAGCAGCCCCCATGGCCAGTTCACCTTCCGACCGCTCCCCCCACCGCCACCCCCACCGCACGCCTGTACCTGCAGCCGCCCGCCGCCCCACTCGGGCGAGAACCTCCAGAGGAACACCATGCCCGCCCGCAGCCAGACGAGCCAGGCGAGCCAGGCGGCGGGGGACTCCGGTGCCAACACGCAGCAGGACAGCGTTCAGCTCCACAACAGCTGGGTCCTCAACAGCAACATCCCACTGGAGACCAGCAGTCTGGACTATCTTGGATCCCATCTCCAGCAGCTCCAGGCAGGACTGGCTTTGCAAAGTCCTCCTCTAATGGAGCCGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021052 True 408 mRNA 0.64 3 1045175 1052182

Neighbor

gene id symbol gene type direction distance location
AMCG00021050 stag2,LOC107561283,LOC107600152 coding upstream 147295 879806 ~ 897880 (+)
AMCG00021047 NA coding upstream 188705 849545 ~ 856470 (+)
AMCG00021045 NA coding upstream 288436 749408 ~ 756739 (+)
AMCG00021046 gria3,LOC105893193 coding upstream 308190 717627 ~ 736985 (+)
AMCG00021043 gria3,LOC104962462,LOC107733408 coding upstream 370598 672030 ~ 674577 (+)
AMCG00021058 NA coding downstream 657151 1709333 ~ 1739006 (+)
AMCG00021062 NA coding downstream 913630 1965812 ~ 1973074 (+)
AMCG00021071 tcp1,LOC107549176 coding downstream 989642 2041824 ~ 2048003 (+)
AMCG00021070 zc3h12b,LOC106567790,LOC106603314 coding downstream 1025242 2077424 ~ 2081654 (+)
AMCG00021074 msn,msna,moes,LOC106567791 coding downstream 1062249 2114431 ~ 2145920 (+)
G83153 NA non-coding upstream 262519 777159 ~ 782656 (+)
G83114 NA non-coding upstream 759043 285921 ~ 286132 (+)
G83086 NA non-coding upstream 799856 243756 ~ 245319 (+)
G83221 NA non-coding downstream 294269 1346451 ~ 1346771 (+)
G83325 NA non-coding downstream 1030932 2083114 ~ 2083451 (+)
G83338 NA non-coding downstream 1053000 2105182 ~ 2106906 (+)
G83374 NA non-coding downstream 1149112 2201294 ~ 2201559 (+)
G83397 NA non-coding downstream 1226614 2278796 ~ 2293041 (+)
AMCG00021049 NA other upstream 118700 918006 ~ 926475 (+)
AMCG00021063 NA other downstream 865306 1917488 ~ 1919366 (+)
AMCG00021076 NA other downstream 1157300 2209482 ~ 2230147 (+)
G83624 NA other downstream 2745659 3797841 ~ 3798783 (+)
AMCG00021113 vma21,LOC107565438,LOC107741184,LOC107680358,LOC108442053 other downstream 3074888 4127070 ~ 4129373 (+)
AMCG00021114 NA other downstream 3150529 4202711 ~ 4233797 (+)

Expression


Co-expression Network