Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043260124.1 |
| length | 979 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 8 |
| gene id | LOC122359904 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056714.1 |
| NCBI id | CM032083.1 |
| chromosome length | 28146790 |
| location | 18758305 ~ 18761771 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0006511 | ubiquitin-dependent protein catabolic process | biological_process |
| GO:0019773 | proteasome core complex, alpha-subunit complex | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0004298 | threonine-type endopeptidase activity | molecular_function |
| id | description |
|---|---|
| K02726 | PSMA2; 20S proteasome subunit alpha 2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU168550 | lncRNA | upstream | 89118 | 18667845 ~ 18669187 (+) | True | G114175 |
| TU168546 | lncRNA | upstream | 93543 | 18663828 ~ 18664762 (+) | True | G114172 |
| TU168547 | lncRNA | upstream | 93543 | 18663973 ~ 18664762 (+) | False | G114172 |
| XR_006252834.1 | lncRNA | upstream | 104700 | 18650773 ~ 18653605 (+) | True | LOC122360728 |
| TU168497 | lncRNA | upstream | 107730 | 18649391 ~ 18650575 (+) | False | G114131 |
| TU168501 | lncRNA | downstream | 4847 | 18766618 ~ 18888286 (+) | True | G114132 |
| XR_006252829.1 | lncRNA | downstream | 46973 | 18808744 ~ 18821024 (+) | False | LOC122360692 |
| XR_006252828.1 | lncRNA | downstream | 47398 | 18809169 ~ 18821024 (+) | False | LOC122360692 |
| XR_006252830.1 | lncRNA | downstream | 59746 | 18821517 ~ 18825388 (+) | True | LOC122360693 |
| XR_006252770.1 | lncRNA | downstream | 65483 | 18827254 ~ 18841584 (+) | True | LOC122360132 |
| XM_043260648.1 | mRNA | upstream | 6619 | 18704403 ~ 18751686 (+) | True | LOC122360227 |
| XM_043260647.1 | mRNA | upstream | 11481 | 18716153 ~ 18746824 (+) | False | LOC122360227 |
| XM_043261626.1 | mRNA | upstream | 73790 | 18683319 ~ 18684515 (+) | True | LOC122360773 |
| XM_043261701.1 | mRNA | upstream | 78212 | 18675560 ~ 18680093 (+) | True | LOC122360853 |
| XM_043260271.1 | mRNA | upstream | 84594 | 18671959 ~ 18673711 (+) | True | LOC122360004 |
| XM_043261901.1 | mRNA | downstream | 493 | 18762264 ~ 18779383 (+) | True | LOC122361002 |
| XM_043260294.1 | mRNA | downstream | 220318 | 18982089 ~ 18983105 (+) | True | LOC122360014 |
| XM_043260295.1 | mRNA | downstream | 223139 | 18984910 ~ 18986011 (+) | True | LOC122360015 |
| XM_043260301.1 | mRNA | downstream | 240780 | 19002551 ~ 19013239 (+) | True | LOC122360019 |
| XM_043260297.1 | mRNA | downstream | 267295 | 19029066 ~ 19052616 (+) | True | ntrk1 |
| TU168504 | other | upstream | 78225 | 18679190 ~ 18680080 (+) | False | LOC122360853 |
| TU168130 | other | upstream | 910895 | 17841817 ~ 17847410 (+) | True | ensab |
| TU167860 | other | upstream | 1351109 | 17400334 ~ 17407196 (+) | True | acbd7 |
| TU167859 | other | upstream | 1356548 | 17400334 ~ 17401757 (+) | False | acbd7 |
| TU167460 | other | upstream | 1934327 | 16820950 ~ 16823978 (+) | False | sec61b |
| TU168577 | other | downstream | 47383 | 18809154 ~ 18821136 (+) | True | LOC122360692 |
| TU168594 | other | downstream | 65483 | 18827254 ~ 18840228 (+) | False | LOC122360132 |
| TU168814 | other | downstream | 436033 | 19197804 ~ 19253046 (+) | True | G114352 |
| TU168846 | other | downstream | 565333 | 19327104 ~ 19328763 (+) | True | G114382 |
| TU169046 | other | downstream | 884187 | 19645958 ~ 19647806 (+) | False | LOC122360533 |
