RNA id: XM_043218669.1


Basic Information

Item Value
RNA id XM_043218669.1
length 1838
RNA type mRNA
GC content 0.42
exon number 10
gene id katnbl1
representative False

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 15158987 ~ 15162918 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gtttagatttaaaatgtatgttggACTATATCAAATGTTGgacaaatgttgtttaaaaccCCATGAAGCTGGTTAATACATTTCTAGGAGTGTGCAATTTCAGCTAATGGTTCATGGAGAAACgttttagtaaaatgtttttttccaaagccGAGCAGTTCCATTATTGTCCCGTTAGATGTCGCTAAACCCTCAGTCCTGTGGAGCTTCACCCATCCCAGCATTtcaagtttgtatttatttgaatggtCCTTCCTTCCCTCTGAAATCCACTCAAATTCCCGTTTCTTCCTGGTTGCATATGGACGTGCTCTCGGATATATAACGTGCTTTAGGATGCATAGACAACTTTACACAATGTCATGAGTCCCTTATTATGGCCACTGGAAGTCATGTTGGAAGTAATGCAGAAGTCCACAGGCTCAAGCAGGCCCAGCCTCATGATCTTCTCAAACGTATTGTTTGTTCTGGAGATGAGAAGAACATGAGGGAGGTGGATTATTCACTGAAGGACGAAACCGATCAAGAGAGATTTCCAGTGGGCCGTTGTGTGCACAAATACAGCAAAGCGAAGCGAGCAGTGGTTAACAAGAAGAAAACGCGTCACTCTGGGGTGGGATCAAGAGCATGTCGGAGATCGCCCACCGCAAGCAGGACGTCTGACATggcaaacaaagaaaatgaactGACCTGTGCTGATGACGTGCAGGCTATTCTTTACAGTGACAACTGTGGGTTCCCTGTGAACTCAACAGACGCCTCAAAAATGGCAGGAGCTGGCTCCAAGTACAGTGATTATTTCACTGAGTTATCAAAAGACCATGAAGCCATGACTCATGTGCTCTTTGGAAGAAATCTGAGACTGAATGTTGCTTTGACTCTTTGGCGGAAAAATGCAAGCGAACTTGTGGCATACTTGAACAGAATACAAGACACAGGGGTGCTTGTTGACTGTTTGCCAGTACTCACTAAAAGTCTTCAGGAAGAACAGCCATGTATTTCAATAGGCTGTTGTGTTGACCTTTTACCACAAGTGAAAGTGATTCTTAACACTACATATGAAGAACACCTCATCGTAGCTTTACACTGGGTTCAATCTATCATTAAAAAATGGTGGTCTGAGCTCTCCACAAACAACAAAAGCTTGCACGATGACTTTTCAAATGACAGCAGGAATGTTCAGGCAATGAAGACGATGCTTCTTGAACTGTGGGAGGGGAAGAGACACTTAAGCTCAGTTCCAGGAACTGTTGGAGAAACAGCAAagATCATAGAATCGTATGTGTCACAACTGCGCTGATGGATCATTGTAGCACACTATGGAGATAACCACTACGAACCCTTGGTGCATTTTAAGCTTTTGATTGGCTTGGAGCTGGTGAATCTGAAGCTCGGTAGGCCGTGGTGAATTGGGGATAGATGAACTGAACAATTCAGACACTCCATTTTCAGCACTGGAGGAGGAACTCTTCTTGCAGGCACTGAATGACTGCTTCACATTGAAGTGGACTTGCTTAGGGGCACATAATCAACTCCATGAGACTCTCTGGAATCAGGCAACTCACTGAAGTGCCAAGCAGAGCTTTTAACTGTTGCACTTGTAGTGCTATGGTGTGAATCTGCTTAAGTGGATGTGATTGTGTAAGTGTACCTTCatgagatgtattttttttgttttgatttgttttcgttttttcaGTCATGCACTTGAATTGCAGGAGTTTTAAGTTATTAGTGTGGTGTTGTCCATTGCCTGATCATGAATGGATATTTAAGTGTAATGTGTACatagtgatttttcttttaatcagctttcaaataaatttacataaactaaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006247307.1 lncRNA upstream 82326 15057216 ~ 15076661 (+) True LOC122325557
TU204737 lncRNA upstream 143615 15009339 ~ 15015372 (+) True slc10a1
TU204727 lncRNA upstream 179310 14976262 ~ 14979677 (+) True G138675
TU204725 lncRNA upstream 179310 14976330 ~ 14979677 (+) False G138675
XR_006247214.1 lncRNA upstream 254476 14903324 ~ 14904511 (+) True LOC122324711
TU204762 lncRNA downstream 19884 15182802 ~ 15190219 (+) True aven
TU204801 lncRNA downstream 96077 15258995 ~ 15278536 (+) True G138726
TU204805 lncRNA downstream 96077 15258995 ~ 15278536 (+) False G138726
TU204818 lncRNA downstream 128568 15291486 ~ 15292209 (+) True G138732
TU204834 lncRNA downstream 205273 15368191 ~ 15368542 (+) True G138743
XM_043218768.1 mRNA upstream 106849 15043439 ~ 15052138 (+) True gpr176
XM_043219132.1 mRNA upstream 117103 15037737 ~ 15041884 (+) True acot20
XM_043219406.1 mRNA upstream 149421 15003410 ~ 15009566 (+) False slc10a1
XM_043219960.1 mRNA downstream 606 15163524 ~ 15165910 (+) True emc7b
XM_043219959.1 mRNA downstream 6437 15169355 ~ 15186000 (+) False aven
XM_043220351.1 mRNA downstream 97509 15260427 ~ 15276678 (+) True fmn1
XM_043219481.1 mRNA downstream 159795 15322713 ~ 15332877 (+) True ywhaqa
XM_043219476.1 mRNA downstream 170588 15333506 ~ 15341938 (+) True adam17b
XR_006247222.1 other upstream 149421 15003410 ~ 15009566 (+) False slc10a1
TU204312 other upstream 1104154 14051993 ~ 14054833 (+) True tmem251
TU204309 other upstream 1104619 14051993 ~ 14054368 (+) False tmem251
TU204136 other upstream 1487713 13668439 ~ 13671274 (+) False syne1a
XR_006247292.1 other upstream 1724474 13416681 ~ 13434513 (+) False aasdh
TU205015 other downstream 558943 15721861 ~ 15845645 (+) True LOC122325444
TU205035 other downstream 600196 15763114 ~ 15797028 (+) True G138869
TU205021 other downstream 757857 15920775 ~ 15922280 (+) False LOC122325444
XR_006247306.1 other downstream 3445594 18608512 ~ 18634663 (+) False cnih3
XR_006247305.1 other downstream 3445594 18608512 ~ 18633193 (+) False cnih3

Expression Profile