RNA id: TU230785


Basic Information

Item Value
RNA id TU230785
length 732
lncRNA type inter_gene
GC content 0.30
exon number 1
gene id G155824
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 8624905 ~ 8625636 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tcaaaaaatgaaaaaagcaccCCACAGGCTAAATAGCTAACATTTCCAATTTGACACGTTTAGTGAACCTTGCAATAATACGTTAACGCATTGctatataaatatcataaagcAGAATTAAATGCTTGTAATAGTTATTAAAATGTCCTATCTGTCAGGATATATTACAGGTATTTGGTACAATCAATTTACCTCCCTTTtgaaacatacatttttctctgaaatgtttccattttccctttttctttcaACTTGAAAATTACATATACTCTTAAAAATAGAGCTtccaaaaggttttttttgtacagcaatgccatagaagaaccatttttgggtCCTCAAAGCCCTTTCAgtaaacagttcttaaaagaagcattttttcttagtgtgaaaaacattttattaatctaaagaacctttttgtgGAATGAAAAGGTTactaaaggttctttgtggaaccactGATACTAATAAAGAGGATTTATATTTAAGAGCGTAGTATTGAATTTTCACCGATCGAATTGTAGACAACAGAGAAGAAACATGgaattttattcatcaaaattaGCACTAGCCTGTATGTTTTCCTtgcttaaaatatgatttttattatgctttggcatttatatacacaaatactattatcaaaataaacactATCAAACAACGCAGTCTAAATGAATTGTAATGAAGCGgtacaaaaacaaagagaaaaggtctgtcagtgtgtgt

Function

GO:

id name namespace
GO:0016503 pheromone receptor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU230784 lncRNA upstream 116 8624130 ~ 8624789 (+) True G155823
TU230773 lncRNA upstream 7900 8613414 ~ 8617005 (+) True G155813
TU230693 lncRNA upstream 214860 8408166 ~ 8410045 (+) True G155756
XR_006247805.1 lncRNA upstream 548585 8054337 ~ 8076320 (+) True LOC122328539
TU230593 lncRNA upstream 587642 8036903 ~ 8037263 (+) True G155704
TU230792 lncRNA downstream 3157 8628793 ~ 8629065 (+) True G155829
TU230793 lncRNA downstream 65249 8690885 ~ 8691100 (+) True G155830
XR_006247812.1 lncRNA downstream 72542 8698178 ~ 8700822 (+) True LOC122328608
TU230817 lncRNA downstream 195802 8821438 ~ 8938375 (+) True G155850
TU230819 lncRNA downstream 275378 8901014 ~ 8937967 (+) False G155850
XM_043225409.1 mRNA upstream 270995 8351800 ~ 8353910 (+) True LOC122329212
XM_043224457.1 mRNA upstream 283126 8334954 ~ 8341779 (+) True LOC122328648
XM_043224456.1 mRNA upstream 283126 8336790 ~ 8341779 (+) False LOC122328648
XM_043224454.1 mRNA upstream 283126 8336794 ~ 8341779 (+) False LOC122328648
XM_043224225.1 mRNA upstream 291740 8321705 ~ 8333165 (+) True LOC122328506
XM_043224775.1 mRNA downstream 3568 8629204 ~ 8689833 (+) True pex14
XM_043224614.1 mRNA downstream 294083 8919719 ~ 8922523 (+) False tardbpa
XM_043224613.1 mRNA downstream 294084 8919720 ~ 8922523 (+) False tardbpa
XM_043224612.1 mRNA downstream 294085 8919721 ~ 8922523 (+) False tardbpa
XM_043224615.1 mRNA downstream 294087 8919723 ~ 8924271 (+) True tardbpa
TU230751 other upstream 136264 8488086 ~ 8488641 (+) True G155799
TU230667 other upstream 291529 8331741 ~ 8333376 (+) False LOC122328506
TU230347 other upstream 1320547 7299279 ~ 7304358 (+) False tcea2
TU230359 other upstream 1385986 7225994 ~ 7238919 (+) True G155561
TU230095 other upstream 2030170 6592606 ~ 6594735 (+) False si:ch211-220i18.4
TU230843 other downstream 400872 9026508 ~ 9033098 (+) True lzic
TU230931 other downstream 495248 9120884 ~ 9122374 (+) False G155927
TU230934 other downstream 495248 9120884 ~ 9122393 (+) True G155927
TU231143 other downstream 1098582 9724218 ~ 9769620 (+) False G156081
TU231144 other downstream 1098582 9724218 ~ 9769620 (+) False G156081

Expression Profile