RNA id: TU230667



Basic Information


Item Value
RNA id TU230667
length 721
RNA type TUCP
GC content 0.45
exon number 2
gene id LOC122328506
representative False

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 8321705 ~ 8333376 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AATCAATACACTTTCTTTTGTGATTCGATTCCAAGTAACACTTATACGCCGCTACAGAGTAAGGGTTTTATCATATGCGCTTGGGCTTTCCTCTGATCTCTTTGTCTGTGCGTTTCAGGATTCTCTCATCTGGATGTGATGCTGGTCGAATGCTACGATCCTAAAGCAGATCAGTGGAGCATCCTGCAAACGCCCATCCTAGAGGGACGCAGCGGGCCTGGATGCGCAGTTCTTGATGACAGTATTTACTTGGTGGGAGGCTACAGCTGGAGCATGGGGGCGTATAAGTCATCCACCATTTGTTACAGCCCAGAGAAAGGCACATGGACTGAAATGGAAGGAGAAGTGGCCGAACCTTTAGCCGGACCGGCCTGTGCCACAGTCATACTGCCAGCCTGTTTACCATTTAACAAATAACTATATAGAGCGCCGGATAAAGTGGAAAACCTGTCGGGATGGGAAGTCAATGgctaaatgaatcaaataaatgaggaGACTCTCCCTATGGAACGCCCCAGCTTTTGAACAGGAGGTGATGAGGTgtacagattattattttttactggtCTGACAAGAGCACTTTGTTTCTTTCATACCTAACAGTTTTAAACTGATATAATCATCGACTTTACGTATTTGATGCGCACGTGTGTTGACATTCAGCTGCTCACGTTCAATCCTTTTTTATCATAAACGTTTTGACACGGCACGCATAGTTTTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006247805.1 lncRNA upstream 255421 8054337 ~ 8076320 (+) True LOC122328539
TU230593 lncRNA upstream 294478 8036903 ~ 8037263 (+) True G155704
TU230588 lncRNA upstream 346155 7984095 ~ 7985586 (+) True G155701
TU230519 lncRNA upstream 391985 7938606 ~ 7939756 (+) True G155660
TU230509 lncRNA upstream 399685 7929733 ~ 7932056 (+) True G155655
TU230693 lncRNA downstream 74790 8408166 ~ 8410045 (+) True G155756
TU230773 lncRNA downstream 280038 8613414 ~ 8617005 (+) True G155813
TU230784 lncRNA downstream 290754 8624130 ~ 8624789 (+) True G155823
TU230785 lncRNA downstream 291529 8624905 ~ 8625636 (+) True G155824
TU230792 lncRNA downstream 295417 8628793 ~ 8629065 (+) True G155829
XM_043225408.1 mRNA upstream 23977 8281226 ~ 8307764 (+) True LOC122329211
XM_043225307.1 mRNA upstream 156222 8156193 ~ 8175519 (+) True ntsr1
XM_043224025.1 mRNA upstream 198790 8114941 ~ 8132951 (+) False slco4a1
XM_043224026.1 mRNA upstream 198790 8120226 ~ 8132951 (+) True slco4a1
XM_043225458.1 mRNA upstream 411700 7884296 ~ 7920041 (+) True plagl2
XM_043224457.1 mRNA downstream 1578 8334954 ~ 8341779 (+) True LOC122328648
XM_043224456.1 mRNA downstream 3414 8336790 ~ 8341779 (+) False LOC122328648
XM_043224454.1 mRNA downstream 3418 8336794 ~ 8341779 (+) False LOC122328648
XM_043225409.1 mRNA downstream 18424 8351800 ~ 8353910 (+) True LOC122329212
XM_043224775.1 mRNA downstream 295828 8629204 ~ 8689833 (+) True pex14
TU230347 other upstream 1027383 7299279 ~ 7304358 (+) False tcea2
TU230359 other upstream 1092822 7225994 ~ 7238919 (+) True G155561
TU230095 other upstream 1737006 6592606 ~ 6594735 (+) False si:ch211-220i18.4
TU229052 other upstream 4635103 3694652 ~ 3696638 (+) False ube2t
TU229053 other upstream 4635103 3694652 ~ 3696638 (+) False ube2t
TU230751 other downstream 154710 8488086 ~ 8488641 (+) True G155799
TU230843 other downstream 693132 9026508 ~ 9033098 (+) True lzic
TU230931 other downstream 787508 9120884 ~ 9122374 (+) False G155927
TU230934 other downstream 787508 9120884 ~ 9122393 (+) True G155927
TU231143 other downstream 1390842 9724218 ~ 9769620 (+) False G156081

Expression Profile