RNA id: TU230751


Basic Information

Item Value
RNA id TU230751
length 556
RNA type TUCP
GC content 0.50
exon number 1
gene id G155799
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 8488086 ~ 8488641 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCTGAAACAAATGCTAAGAAAAGTCATTGACATTGATGGGAAGAATTGGGATCAGTTGTTACCATATGTCTTGTTTTCTATTCGAGAGGTTCCACAAAGCTCCACCGGGTTCTCACCCTTCGAACTACTTTATGGACGCCGACCACGAGGGATGTTAGACCTTGCCAAGGAAAGCTGGGAACGGCAGCCATCACGACATCACTCCGTCATCGAATATGTAGAACAGATGCATGATCGAATGACAAAGGTTTGGCCGGTTGTACGAGAACACATGCAACAAGCCCAACTACAGCAGGCCCAGGTATACAACCGAGGGGCACAAGTCCGAGAATTTCTCCCAGGTGAAAAGGTACTGGTTTTAATCCCGTCCAGTGAGTGCAAATTCCTGGCCCGGTGGCTAGGTCCCTATGAGGTGGTAGAACGGACAGGCCCAGTCAACTATAAGGTGCGCCAACCCGGTCGGAGAAAGAGCCAGCAAATCTACCATGTAAACCTCCTAAAGCCATGGCAGGAGCCGGTTCCCTCTCCCAGTGATGTCTTTGCAGCAGAGATCCAG

Function

GO:

id name namespace
GO:0031503 protein-containing complex localization biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU230693 lncRNA upstream 78041 8408166 ~ 8410045 (+) True G155756
XR_006247805.1 lncRNA upstream 411766 8054337 ~ 8076320 (+) True LOC122328539
TU230593 lncRNA upstream 450823 8036903 ~ 8037263 (+) True G155704
TU230588 lncRNA upstream 502500 7984095 ~ 7985586 (+) True G155701
TU230519 lncRNA upstream 548330 7938606 ~ 7939756 (+) True G155660
TU230773 lncRNA downstream 124773 8613414 ~ 8617005 (+) True G155813
TU230784 lncRNA downstream 135489 8624130 ~ 8624789 (+) True G155823
TU230785 lncRNA downstream 136264 8624905 ~ 8625636 (+) True G155824
TU230792 lncRNA downstream 140152 8628793 ~ 8629065 (+) True G155829
TU230793 lncRNA downstream 202244 8690885 ~ 8691100 (+) True G155830
XM_043225409.1 mRNA upstream 134176 8351800 ~ 8353910 (+) True LOC122329212
XM_043224457.1 mRNA upstream 146307 8334954 ~ 8341779 (+) True LOC122328648
XM_043224456.1 mRNA upstream 146307 8336790 ~ 8341779 (+) False LOC122328648
XM_043224454.1 mRNA upstream 146307 8336794 ~ 8341779 (+) False LOC122328648
XM_043224225.1 mRNA upstream 154921 8321705 ~ 8333165 (+) True LOC122328506
XM_043224775.1 mRNA downstream 140563 8629204 ~ 8689833 (+) True pex14
XM_043224614.1 mRNA downstream 431078 8919719 ~ 8922523 (+) False tardbpa
XM_043224613.1 mRNA downstream 431079 8919720 ~ 8922523 (+) False tardbpa
XM_043224612.1 mRNA downstream 431080 8919721 ~ 8922523 (+) False tardbpa
XM_043224615.1 mRNA downstream 431082 8919723 ~ 8924271 (+) True tardbpa
TU230667 other upstream 154710 8331741 ~ 8333376 (+) False LOC122328506
TU230347 other upstream 1183728 7299279 ~ 7304358 (+) False tcea2
TU230359 other upstream 1249167 7225994 ~ 7238919 (+) True G155561
TU230095 other upstream 1893351 6592606 ~ 6594735 (+) False si:ch211-220i18.4
TU229052 other upstream 4791448 3694652 ~ 3696638 (+) False ube2t
TU230843 other downstream 537867 9026508 ~ 9033098 (+) True lzic
TU230931 other downstream 632243 9120884 ~ 9122374 (+) False G155927
TU230934 other downstream 632243 9120884 ~ 9122393 (+) True G155927
TU231143 other downstream 1235577 9724218 ~ 9769620 (+) False G156081
TU231144 other downstream 1235577 9724218 ~ 9769620 (+) False G156081

Expression Profile