RNA id: TU31624


Basic Information

Item Value
RNA id TU31624
length 228
lncRNA type inter_gene
GC content 0.52
exon number 2
gene id G21269
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 19470999 ~ 19472687 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCTTTCTTATCTGCAGGGGCATGTGTGAGGAGCTGACTCTTGACCGTGTCCGCACTGATCTTCTCATCCACTCCCACCAGGACTTTCAGGGCTTTAGAGTCCACGTCCCCCACGTCTACACCTCCTTCATGATGGAAGAGCATGTAATCGCCTTCACGTGTGGCATAGATACACACGTAAAACTCCTCCTCCTGCTTGATCAGCTGATCTGGCTTCACAACCAACCGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006250479.1 lncRNA upstream 11364 19455426 ~ 19459635 (+) True LOC122341657
TU31570 lncRNA upstream 30353 19438007 ~ 19440646 (+) True G21239
TU31539 lncRNA upstream 165941 19304852 ~ 19305058 (+) True G21215
TU31441 lncRNA upstream 183350 19258917 ~ 19287649 (+) True G21151
TU31498 lncRNA upstream 616456 18854109 ~ 18854543 (+) True G21188
TU31590 lncRNA downstream 10814 19483501 ~ 19484384 (+) True G21246
TU31630 lncRNA downstream 17086 19489773 ~ 19490022 (+) True G21275
TU31631 lncRNA downstream 17442 19490129 ~ 19490595 (+) True G21276
TU31632 lncRNA downstream 18468 19491155 ~ 19491623 (+) True G21277
TU31654 lncRNA downstream 78926 19551613 ~ 19623289 (+) True G21295
XM_043235343.1 mRNA upstream 16684 19451411 ~ 19454315 (+) True si:ch73-141c7.1
XM_043235344.1 mRNA upstream 21337 19447171 ~ 19449662 (+) True hsd17b1
XM_043235342.1 mRNA upstream 25102 19443220 ~ 19445897 (+) True LOC122341749
XM_043235801.1 mRNA upstream 53108 19409591 ~ 19417891 (+) True rabep2
XM_043235802.1 mRNA upstream 62315 19403562 ~ 19408684 (+) False si:ch211-11k18.4
XM_043229689.1 mRNA downstream 36401 19509088 ~ 19511507 (+) True nkiras2
XM_043233601.1 mRNA downstream 444983 19917670 ~ 19921271 (+) False aspdh
XM_043233600.1 mRNA downstream 445519 19918206 ~ 19921271 (+) False aspdh
XM_043233599.1 mRNA downstream 445522 19918209 ~ 19921271 (+) True aspdh
XM_043233554.1 mRNA downstream 458046 19930733 ~ 19941580 (+) True pold1
TU31603 other upstream 67823 19399832 ~ 19403176 (+) False ypel3
TU31597 other upstream 67823 19399871 ~ 19403176 (+) False ypel3
TU31600 other upstream 67823 19399871 ~ 19403176 (+) False ypel3
TU31536 other upstream 178658 19291445 ~ 19292341 (+) True G21213
TU31520 other upstream 477802 18991458 ~ 18993197 (+) False G21202
TU32077 other downstream 591803 20064490 ~ 20068001 (+) False LOC122341338
TU32078 other downstream 593443 20066130 ~ 20068001 (+) False LOC122341338
TU32169 other downstream 634159 20106846 ~ 20107836 (+) False LOC122341546
TU32173 other downstream 712880 20185567 ~ 20187198 (+) False eftud2
TU32181 other downstream 714841 20187528 ~ 20188083 (+) False eftud2

Expression Profile