RNA id: TU88285


Basic Information

Item Value
RNA id TU88285
length 612
RNA type TUCP
GC content 0.51
exon number 5
gene id cdc14b
representative False

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 537775 ~ 550687 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCAGGGCTTTTCACAAACTTGCCTTCGCTACGTCACCGGCTGGACAACTGGCTCAAATACAGTTCGGTCTGCAGCGCATGGAGCCGTTAGAAGCAGGACCATGCGAACCAAAGCCCAAAGCCTGCGTCCGTCGCGCGTTCGCCCCTGAAGCGCCATCTTTTCGCGCGTGAGGAAGCATGAAGCGCAAGAGCGAGCGACGGAGCGAGTCGAGGAAGAGGCTCTGCGCGTCTCTGAGGGACCAGACCGAGTCAAAGAGCGAGATTTACCTTCGTATCACAGatCAGCTGTATTTCGCTCTTCTTCATCAGAAGGTGAAGAGCACTCCTGACAGACACTGTTTCTGCATCGATGAAGAGCTGTCCTATGAGAACTTCTATGCGGACTTCGGCCCGCTCAACCTGGCCATGTTTTATCGCTTCTGTTGCAAACTCAACAAAAAGCTGAAGTCTTGTGCTCTTGCGAAGAAGACGATAGTGTTTTATACCTGCGGTGACAGAAAGAAACAAGCCAATGCTGCATATTTGATCGGCTCTTATGCTGTGATGCATCTACAGAAAACGCCAGAAGAAGCATACAGCCTTCTAGTCTCTCAAAATGCGTCTTATCTTCCTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU88200 lncRNA upstream 275214 159691 ~ 262580 (+) False G59656
TU88201 lncRNA upstream 275214 196796 ~ 262580 (+) False G59656
TU88211 lncRNA upstream 301136 223973 ~ 236658 (+) True G59662
TU88210 lncRNA upstream 301136 236073 ~ 236658 (+) False G59662
TU88199 lncRNA upstream 338637 196796 ~ 199157 (+) True G59656
TU88294 lncRNA downstream 22794 562860 ~ 565830 (+) True G59735
TU88295 lncRNA downstream 22892 562958 ~ 565830 (+) False G59735
TU88337 lncRNA downstream 27229 567295 ~ 644568 (+) True G59756
XR_006251597.1 lncRNA downstream 59645 599711 ~ 608007 (+) True LOC122350371
TU88345 lncRNA downstream 86783 626849 ~ 727005 (+) True G59762
XM_043246276.1 mRNA upstream 644 534683 ~ 537150 (+) True prxl2c
XM_043247973.1 mRNA downstream 13007 553073 ~ 557380 (+) True znf367
XM_043246777.1 mRNA downstream 73478 613544 ~ 628517 (+) True smyd1b
XM_043246778.1 mRNA downstream 73486 613552 ~ 628517 (+) False smyd1b
XM_043247688.1 mRNA downstream 95357 635423 ~ 648303 (+) False znf366
XM_043247689.1 mRNA downstream 95361 635427 ~ 647786 (+) False znf366
TU88420 other downstream 263587 803653 ~ 804839 (+) True G59807
XR_006251599.1 other downstream 302011 842077 ~ 852004 (+) True znf608
TU89150 other downstream 1375394 1915460 ~ 1918371 (+) True G60259
TU89212 other downstream 1474814 2014880 ~ 2017520 (+) False polb
TU89216 other downstream 1490812 2030878 ~ 2033063 (+) False LOC122350053

Expression Profile