RNA id: XM_043246910.1


Basic Information

Item Value
RNA id XM_043246910.1
length 3063
RNA type mRNA
GC content 0.40
exon number 3
gene id ugt5e1
representative True

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 6803516 ~ 6807969 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCCAAAGTTCAACCTCATGCTGTTTCTAGCCCGGTGTCTATGCTAGTCACTACTTTTTGAGAAACTTTACTTGCTCTTTTGCAAGGCTGCCTGGCAGATCAGGAATAAGAACTGCACCGTTAGGGAATTCTTTCACATTGCAAAAGTTCTCTTCAGGACATCGCCACAAACCGGCTTCACTTTACCTGTTTTTTCTTCCCAAGAGTTCCAAGTCCAGAGaCAATGTTGCTGCATCCCCAAATCTTTGTCCTTGTTGCCTTACTTTGGAGTGTCCCACCACTTTCCCTGGCTGGAAAGATCCTGGTGTACCCAGTGGATGGAAGCCACTGGCTTAACATGGACATTTTACTACAAGAGCTTCATCAGCGAGGTCACAAACTGACAGTTGTCCGTTCGGCCAACAGTTGGTACATCCCAGAGACCACTGCACACTATACATCCATCACCATCCGTGTCAATCATCTCTCCAGCCTGGAGGACCCTGAGTACATGGCATCCtttcttaaaagaaacattGACATTCAAAGAGGGGAAGGAACTGTATGGTCATTTATAGCCCTGCAGAAAGAAGTAATTACTCTTTTAGAAGAGTCTCACAAATCTTCTGCTGAGATGGTGAGGACCATTCTAGAAGATAAAAAGCTTGTTAAAAAACTCAAAGAAACCAAATATGATTTAATGCTAACAGATCCTGGATTTGCAGGAGGGGTCATATTAGGCACACACTTGGGTCTACCAATGGTGTACAATGTACGATGGATAACAAATGCAGAAGGGCACTTTGCAATTGCACCCTCGCCGCTTTCTTACATTCCAACTATCGGATCCAGGGTGACAGATAAAATGAGCTttacaaataaactgaaaaatttCTTGCATTATGGAATCGGCCAATACATAGACTATTTGCTCACAAGACCTCTTTATCAAGGAGTTATCAGCGAACACATAGACCCAAACACCAATGTGTACACTCTGATCCAAGGAGCGGATCTGTGGCTCATGAGAGTAGATTTTGTATTTGAGTTCCCTCGTCCTACTATGCCCAATGTGGTCTACATTGGAGGCTTCCAGTGCAAACCATCCAAACCTCTACCAGATGAATTGGAGAAGTTTGTCGAGAGTTCTGGTGAGCAAGGGGTGGTGATCATGTCTTTGGGTACTCTGCTTGGAAGTCTAGTTCCTGACATATCCGAAGTCGTCGCCTCCGCTTTTGCTCGCTTACCACAGAAGGTGATATGGAGGCACGTAGGGGAAAAGCCATCAACGTTGGGGAACAATACACTGATAGTAGACTGGCTCCCTCAAAACGATCTCTTAGGCCATCCTAAAACTAAAGCTTTTGTCAGTCACGGAGGAACTAATGGAATTTACGAGGCTATTTACCACGGCGTTCCGATACTTGGACTTCCACTCATCTTCGACCAGTTTGACAACATGATTCGCTTGGAAGCCAGAGGGGTGGCGAAAATGCTTGAAGTCTCAGCCCTGGATGTAGATAGCCTTGAACAAGCCCTAAGGGACATCCTGGATGAAAATCAACCCTACCAGAAGAACATGCGCAGAATGTCAAGCCTACATCATGACACTCCACTCAAGCCGATGGACAGTGCCATCTTTTGGTTGGAGTTTGTCATGAGACATAAAGGTGCGGCACACCTACGCACCGAGTCCTACAAGCTTCCTTGGTATTCCTACTACTGCGTAGATGTGTTAATGCTGATAATGAGTGTGTTCACAGCAATCTGTCTGCTCTTGGTCTTGATGATCAGGGCATTGTTCAAAGTTTTTGCAAAGAAAGGAAAAACCAAAAGAGAGTGAAGTCATGtacttggtaacactttttttttttttgctaaaggTCGATATCTTTATAGTGCTCTATGCACCACTTTCAATGTGAAAAGCTTTGGTTAGTTACTATGGCACTGGttattaaaggcatagttcacccaaaaattgtaattctgtctttaattactcaccctcatgtcatccCATACCAGATCTTCCTTCATCTtaggaacacaaattaagatgttttgaatttaaaaggcTCAAAAAGGTACCAAAAACATTGTCTAAGTAGTCTATGGGACATTTGTTGTTTAATAGGAATGTTTTGAAGCAACGAGAATGCCTGGCTCTCGTGAACGTGCCTCTCAAACTGAAACTGAGTTAagtaattcttttatttttttcgctCTAAAAATATTCTCGTTGTTAGAACCACTGAAGTCACGTGGGCTGCTTTGACAATGTTTTGGTACCTTTCTGAGCCTTGAACATATATGGACCCTTCCTGTCTGTGGTAGGAaaagaaagctctcagattaaATCTGAAACATGTTAATCgttttgaagatgaatgaaggttttACGGGTTTAggatgacatgagggtgagtaaatgatgacagaattttctgtttgggtgaactaacccttaaCCTCTGCTTGTAAATGCTGTAACTACTTCATCTggttaaaaaaagcattgatAATTTGACAAACATATACCGATGTATTTAAGTAGACCTTTTCTAAACGCTTGGGACCATGGACATTATTTTGGTGCCATCAGCCAGTGTTGTTCATGGTgatcaaacaaagaaaaacccaaaataaaacatttagattcAGATCAGTTTCTAAACTACTTTCCCAAAATGTTCCCCTATCTGGTTTGAAAAAGAAAGTTAATCTTTTCAACTTTTGGTTGAGAGTGTTGCTAAGTCAGGCAGTTCAGACAAACAGGGCAATGTTTTGAGAATGCCACAGAACcagtatttacagtttttgggaaaatttatatatgaatgGCTAACTTAATTTaagcatatataaaattacGTGCATCATACTAATAAATCTGAACAAGTAATGTGTTgctaacaatatttaaatttatttttaaaaaaggaactGCAACAGattgtatttttcagtttgttttattgatttgtaCAGACATTGAATGAACCAGCTGTCTATTTTGCACGTAAATATTTCACTTAACACAACCACCGGCATggtcaacaaaaataaaattattcaaaaatca

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016758 transferase activity, transferring hexosyl groups molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91351 lncRNA upstream 1970 6801006 ~ 6801546 (+) True G61700
TU91323 lncRNA upstream 31560 6764722 ~ 6771956 (+) True G61683
TU91332 lncRNA upstream 39643 6761613 ~ 6763873 (+) True G61688
TU91310 lncRNA upstream 42770 6756105 ~ 6760746 (+) True G61678
TU91297 lncRNA upstream 129048 6670282 ~ 6674468 (+) True G61669
TU91356 lncRNA downstream 8926 6816895 ~ 6817555 (+) True G61705
TU91357 lncRNA downstream 10760 6818729 ~ 6818939 (+) True G61706
TU91358 lncRNA downstream 13393 6821362 ~ 6821623 (+) True G61707
TU91362 lncRNA downstream 19524 6827493 ~ 6829683 (+) True G61710
TU91370 lncRNA downstream 44977 6852946 ~ 6853890 (+) True G61714
XM_043247843.1 mRNA upstream 45415 6725640 ~ 6758101 (+) True doc2d
XM_043247268.1 mRNA upstream 100231 6691984 ~ 6703285 (+) True lonrf1l
XM_043247297.1 mRNA upstream 138204 6651376 ~ 6665312 (+) True jak3
XM_043247298.1 mRNA upstream 152481 6644521 ~ 6651035 (+) True slc5a5
XM_043247850.1 mRNA upstream 227193 6552527 ~ 6576323 (+) True itgb4
XM_043246635.1 mRNA downstream 29671 6837640 ~ 6841972 (+) True tpk2
XM_043247047.1 mRNA downstream 138459 6946428 ~ 6995662 (+) True LOC122350510
XM_043247954.1 mRNA downstream 251022 7058991 ~ 7087640 (+) True acbd6
XM_043246929.1 mRNA downstream 363691 7171660 ~ 7281161 (+) True LOC122350454
XM_043247351.1 mRNA downstream 473756 7281725 ~ 7291248 (+) True LOC122350673
TU91312 other upstream 36973 6756105 ~ 6766543 (+) False G61678
TU91311 other upstream 42770 6756105 ~ 6760746 (+) False G61678
TU90652 other upstream 1539553 5104570 ~ 5263963 (+) True LOC122350082
TU90650 other upstream 1539553 5235779 ~ 5263963 (+) False LOC122350082
TU90653 other upstream 1539553 5235779 ~ 5263963 (+) False LOC122350082
TU91367 other downstream 40512 6848481 ~ 6849711 (+) True G61713
TU91369 other downstream 40512 6848481 ~ 6849711 (+) False G61713
TU91547 other downstream 498150 7306119 ~ 7523896 (+) True soat1
TU91548 other downstream 716666 7524635 ~ 7529068 (+) False soat1
TU92500 other downstream 2896512 9704481 ~ 9705639 (+) True G62483

Expression Profile