LOC122350673


Basic Information

Item Value
gene id LOC122350673
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 7281725 ~ 7291248 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247351.1
ATGGGTATACAGTGGTGTGGCATCAGAACGGGACTGAATGTCTTCCAGTCTTCCAGTAGACCCTTATACCTCTGGGAGGAGCAGACAGCGTTGCCTCACACCTTTTACCTGGCCTTCAGAGTTCAAAGACTGACCATACCTCCTTCTGAAAGCGCCATGCAGGACTCTGAGACTCTGCTCAAACTTCTCTGCTGTGTAGGTATCATGCAGCAAATGACCTTAGTAATGAGTGACCTGACTGGAGATGACCCTGACTGTCCTGATCACAAATCCCACTGTATCCAGAAGTCACAgGAAGAAGACAAGTCTGTTGCGACAACGGATgtagaagataaaaataaaacagtgaagATTGACACAGAAAGAAGCATTCATCAGTGCCCACATATGATGTCATTTCCTTTATCACCTGTAGATTTAAGCAGGCCACATTCACAGACACCAGCAAATGGATCTTTGGAAAGACTATCTAAATTAAAGATGGCAACATCGAGCTGCCGAGCTGATTCtacatatgaaatgaaatctGAATGGGCCAAAGCCTCTAGTTATAAACAAGAGGAGGCAGGTGCGGGTGgaatatacaaaaaagaaactttCATTTCCTCTCTCCCCGTCCAGCCCACCAAAACAACtcaatcatttcattttccagAGAACAGGAGCGTGTTTGACACTGAACCTCgaattttaagacaaaatatcAGTTCTACAGCAGGTAGTTCCATTTCACAATCTAAAGATTCTATCAAAATAAGCACTGAAGACAAatcagaggtcaaaggtcagactAATAAGGAGCTCTTGCAGACACTACAGCCATCTGTCTCAGTTCTGAAGAACAGTACAGAGCTTGCCGTTTCAATGAACACAAACCCAGTGGAAATTTCTAGAACAGCAACAAATATCCATCCGATTGAAATTTTAGATTCAGCCAATAATGCGTCGTGGACAAAGTCTGTTAAGGATTCAATCACAGCGCCAAGTGGTTCACTTCAAAACCTGACCCGCGCAGCCATGGAAACCAGCACCGGCAGCGCCTCAGTCAATAAAGTAAAGTCACTGGAGAAGAATGAAGAAATCAGAGTGACTAGTCGACCCACGACGCCGATGCAAACTCAACCTGTAGCAATCACTCAGCTAATGCCTTTTCATCAAACTGGGAGTCCCAGTGCTGAAAGACAGGAAGCTAGTACTgcaccgagagagagagaagatgcaGATGAGACTCCACAGATTAGACAGGAGGAGCAACAAGCCCCTGTGACTGAAGAATTAGAGACTGATGATTGTTATACCGGTGATACTGCTGCCTGTTCAGAACATCCAAATACACCAAATACAACAACAGCCCAgcccaatcagatgcaCAGAAACATAAACAGAGAAGGAGGTCTAATACGCACATCAGGTTTCAGAGGCCTAAGTGGGTATCCAGGCCCACCTGGCTTACCAGGTCCTCCAGGTGAAAAAGGAGACAAAGGGTATGCAGGAGTGATGGGTGATGGGCCAGACAGGAGTACAGAGGACCAATCGGACCGCCAGACAGCTATTGTAGTCTGGTACACATCAGAAGAATGGCAAGCTTTTAAAGGTGCATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247351.1 True 1602 mRNA 0.45 8 7281725 7291248

Neighbor

gene id symbol gene type direction distance location
LOC122350454 cacna1e,LOC107599003 coding upstream 564 7171660 ~ 7281161 (+)
acbd6 acbd6,LOC107665066,LOC107603185,LOC107758008 coding upstream 194085 7058991 ~ 7087640 (+)
LOC122350510 xpr1a,LOC107758009,LOC107755298,LOC107665065,LOC107699288,LOC107603171,LOC107599040 coding upstream 286063 6946428 ~ 6995662 (+)
tpk2 si:dkey-6n6.2,LOC107758011,LOC107755292,LOC107699255,LOC107665075,LOC107603148 coding upstream 439753 6837640 ~ 6841972 (+)
ugt5e1 ugt5e1,LOC107755303 coding upstream 473756 6803516 ~ 6807969 (+)
LOC122350677 NA coding downstream 40 7291288 ~ 7293609 (+)
LOC122350138 NA coding downstream 2867 7294115 ~ 7301060 (+)
LOC122350681 LOC107757981 coding downstream 211067 7502315 ~ 7505609 (+)
LOC122350865 NA coding downstream 214493 7505741 ~ 8019537 (+)
LOC122350882 NA coding downstream 217566 7508814 ~ 7510661 (+)
G61806 cep350,LOC107665052 non-coding upstream 139285 7140470 ~ 7142440 (+)
G61751 NA non-coding upstream 150843 7127730 ~ 7130882 (+)
G61743 NA non-coding upstream 170433 7110964 ~ 7111292 (+)
G61733 xpr1a,LOC107755298,LOC107599040,LOC107665065,LOC107699288,LOC107758009 non-coding upstream 388161 6893272 ~ 6893564 (+)
G61680 NA non-coding upstream 401839 6875349 ~ 6879886 (+)
LOC122350911 NA non-coding downstream 10882 7302130 ~ 7302468 (+)
G61829 NA non-coding downstream 11191 7302439 ~ 7302983 (+)
LOC122350910 LOC107757980 non-coding downstream 11219 7302467 ~ 7303503 (+)
G61820 NA non-coding downstream 200746 7491994 ~ 7493733 (+)
LOC122350887 NA non-coding downstream 206126 7497374 ~ 7501487 (+)
G61713 LOC107550213,LOC107755291,LOC107599058,LOC107700515,LOC107757991,LOC107665059 other upstream 432014 6848481 ~ 6849711 (+)
G61678 LOC107665067,LOC107598994,LOC107757984 other upstream 515182 6756105 ~ 6766543 (+)
LOC122350082 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108438565,LOC108264952,LOC105013926,LOC100700110,LOC105889737 other upstream 2017359 5104570 ~ 5264366 (+)
LOC122350084 atp2a2,LOC107757297,LOC107674294,LOC107566800,LOC107599024,LOC108444117 other upstream 2052117 5226952 ~ 5229608 (+)
ccdc120a LOC107701815,LOC107674368,LOC107584880,LOC107727423,LOC107552222 other upstream 3207828 4029303 ~ 4073897 (+)
soat1 soat1,LOC107549691,LOC107700347,LOC107657858,LOC107758003 other downstream 14871 7306119 ~ 7529086 (+)
smim15 smim15,LOC107700545 other downstream 1185923 8477171 ~ 8478331 (+)
G62483 fam78bb,LOC107717547,LOC107676968,LOC107585866,LOC107751100,LOC107550401,LOC107695225 other downstream 2413233 9704481 ~ 9705639 (+)
col2a1a col2a1a,LOC107585898,LOC107668081,LOC107695274,LOC107549173,LOC107731244 other downstream 3057666 10348914 ~ 10367863 (+)
G62692 cry1ba,LOC107578471,LOC108441644,LOC107668038,LOC101164536,LOC108265656,LOC103358259 other downstream 3140554 10431802 ~ 10478799 (+)

Expression


Co-expression Network