G61743


Basic Information

Item Value
gene id G61743
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 7110964 ~ 7111292 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU91400
CTCGGGTACAGCCAACTTCCAAGTGTGTGAGGGAAGAGGCCTTGAAAGCCGATTGCgttttaataaagtttattaTCGGTGGGGGCTAATCCCCGTGGTAATCTCCCGCAGACCCAAAGGAAAGCAGGATTACTCACTTGCTATAATCCCAATGAAATTGTTAGGATTTAGCTAGCAAAACAGACCAGATGGCAACAGGCTTGTTCTTCCACCCGTGGGCCCGCTCACCCCTTTTCAGACCACTCCTCACCCCAGACACCCTTAAACACAACACATGAGCTATTCATTAAGACACACTTACACTGCACTGATAGGGTAAGCGATGCTCA

Function

GO:

id name namespace
GO:0005579 membrane attack complex cellular_component
GO:0046930 pore complex cellular_component

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection
ko05146 Amoebiasis
ko05322 Systemic lupus erythematosus
ko05020 Prion disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU91400 True 329 lncRNA 0.48 1 7110964 7111292

Neighbor

gene id symbol gene type direction distance location
acbd6 acbd6,LOC107665066,LOC107603185,LOC107758008 coding upstream 23324 7058991 ~ 7087640 (+)
LOC122350510 xpr1a,LOC107758009,LOC107755298,LOC107665065,LOC107699288,LOC107603171,LOC107599040 coding upstream 115302 6946428 ~ 6995662 (+)
tpk2 si:dkey-6n6.2,LOC107758011,LOC107755292,LOC107699255,LOC107665075,LOC107603148 coding upstream 268992 6837640 ~ 6841972 (+)
ugt5e1 ugt5e1,LOC107755303 coding upstream 302995 6803516 ~ 6807969 (+)
doc2d doc2d,LOC107755308,LOC107665068,LOC107603001,LOC107598995,LOC107699113,LOC108413517,LOC107757985 coding upstream 352863 6725640 ~ 6758101 (+)
LOC122350454 cacna1e,LOC107599003 coding downstream 60368 7171660 ~ 7281161 (+)
LOC122350673 NA coding downstream 170433 7281725 ~ 7291248 (+)
LOC122350677 NA coding downstream 179996 7291288 ~ 7293609 (+)
LOC122350138 NA coding downstream 182823 7294115 ~ 7301060 (+)
LOC122350681 LOC107757981 coding downstream 391023 7502315 ~ 7505609 (+)
G61733 xpr1a,LOC107755298,LOC107599040,LOC107665065,LOC107699288,LOC107758009 non-coding upstream 217400 6893272 ~ 6893564 (+)
G61680 NA non-coding upstream 231078 6875349 ~ 6879886 (+)
G61714 NA non-coding upstream 257074 6852946 ~ 6853890 (+)
G61710 NA non-coding upstream 281281 6827493 ~ 6829683 (+)
G61707 LOC107665058,LOC107550196,LOC107700508,LOC107755294,LOC107757994,LOC107599037 non-coding upstream 289341 6821362 ~ 6821623 (+)
G61751 NA non-coding downstream 16438 7127730 ~ 7130882 (+)
G61806 cep350,LOC107665052 non-coding downstream 29178 7140470 ~ 7142440 (+)
LOC122350911 NA non-coding downstream 190838 7302130 ~ 7302468 (+)
G61829 NA non-coding downstream 191147 7302439 ~ 7302983 (+)
LOC122350910 LOC107757980 non-coding downstream 191175 7302467 ~ 7303503 (+)
G61713 LOC107550213,LOC107755291,LOC107599058,LOC107700515,LOC107757991,LOC107665059 other upstream 261253 6848481 ~ 6849711 (+)
G61678 LOC107665067,LOC107598994,LOC107757984 other upstream 344421 6756105 ~ 6766543 (+)
LOC122350082 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108438565,LOC108264952,LOC105013926,LOC100700110,LOC105889737 other upstream 1846598 5104570 ~ 5264366 (+)
LOC122350084 atp2a2,LOC107757297,LOC107674294,LOC107566800,LOC107599024,LOC108444117 other upstream 1881356 5226952 ~ 5229608 (+)
ccdc120a LOC107701815,LOC107674368,LOC107584880,LOC107727423,LOC107552222 other upstream 3037067 4029303 ~ 4073897 (+)
soat1 soat1,LOC107549691,LOC107700347,LOC107657858,LOC107758003 other downstream 194827 7306119 ~ 7529086 (+)
smim15 smim15,LOC107700545 other downstream 1365879 8477171 ~ 8478331 (+)
G62483 fam78bb,LOC107717547,LOC107676968,LOC107585866,LOC107751100,LOC107550401,LOC107695225 other downstream 2593189 9704481 ~ 9705639 (+)
col2a1a col2a1a,LOC107585898,LOC107668081,LOC107695274,LOC107549173,LOC107731244 other downstream 3237622 10348914 ~ 10367863 (+)
G62692 cry1ba,LOC107578471,LOC108441644,LOC107668038,LOC101164536,LOC108265656,LOC103358259 other downstream 3320510 10431802 ~ 10478799 (+)

Expression


Co-expression Network