LOC122350887


Basic Information

Item Value
gene id LOC122350887
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 7497374 ~ 7501487 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251631.1
TTTTAGTGGCCTTCAGAGTTCAAAGACTGACCATACCTCCTTCTGAAAGCGCCATGCAGGACTCTGAGACTCTGCTCAAACTTCTCTGCTGTGTAGGTATCATGCAGCAAATGACCTTAGTAATGAGTGACCTGACTGGAGATGACCCTGACTGTCCTGATCACAAATCCCACTGTATCCAGAAGTCACAgGAAGAAGACAAGTCTGTTGCGACAACGGATgtagaagataaaaataaaacagtgaagATTGACACAGAAAGAAGCATTCATCAGTGCCCACATATGATGTCATTTCCTTTATCACCTGTAGATTTAAGCAGGCCACATTCACAGACACCAGCAAATGGATCTTTGGAAAGACTATCTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251631.1 True 371 lncRNA 0.43 3 7497374 7501487

Neighbor

gene id symbol gene type direction distance location
LOC122350138 NA coding upstream 196314 7294115 ~ 7301060 (+)
LOC122350677 NA coding upstream 203765 7291288 ~ 7293609 (+)
LOC122350673 NA coding upstream 206126 7281725 ~ 7291248 (+)
LOC122350454 cacna1e,LOC107599003 coding upstream 216213 7171660 ~ 7281161 (+)
acbd6 acbd6,LOC107665066,LOC107603185,LOC107758008 coding upstream 409734 7058991 ~ 7087640 (+)
LOC122350681 LOC107757981 coding downstream 828 7502315 ~ 7505609 (+)
LOC122350865 NA coding downstream 4254 7505741 ~ 8019537 (+)
LOC122350882 NA coding downstream 7327 7508814 ~ 7510661 (+)
LOC122350878 LOC107757981,LOC107599044,LOC107757980,LOC107700337 coding downstream 11225 7512712 ~ 7516604 (+)
abl2 abl2,LOC107758002,LOC107699422,LOC107657876,LOC107599009,LOC107707589,LOC107603207 coding downstream 28219 7529706 ~ 7553925 (+)
G61820 NA non-coding upstream 3641 7491994 ~ 7493733 (+)
LOC122350910 LOC107757980 non-coding upstream 193871 7302467 ~ 7303503 (+)
G61829 NA non-coding upstream 194391 7302439 ~ 7302983 (+)
LOC122350911 NA non-coding upstream 194906 7302130 ~ 7302468 (+)
G61806 cep350,LOC107665052 non-coding upstream 354934 7140470 ~ 7142440 (+)
LOC122350892 NA non-coding downstream 9547 7511034 ~ 7511534 (+)
G61841 LOC107700326 non-coding downstream 9596 7511083 ~ 7512428 (+)
LOC122350889 NA non-coding downstream 10066 7511553 ~ 7512436 (+)
G61902 LOC107707585,LOC107757998,LOC107599011 non-coding downstream 99256 7600743 ~ 7604022 (+)
G61916 NA non-coding downstream 248221 7749708 ~ 7756124 (+)
G61713 LOC107550213,LOC107755291,LOC107599058,LOC107700515,LOC107757991,LOC107665059 other upstream 647663 6848481 ~ 6849711 (+)
G61678 LOC107665067,LOC107598994,LOC107757984 other upstream 730831 6756105 ~ 6766543 (+)
LOC122350082 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108438565,LOC108264952,LOC105013926,LOC100700110,LOC105889737 other upstream 2233008 5104570 ~ 5264366 (+)
LOC122350084 atp2a2,LOC107757297,LOC107674294,LOC107566800,LOC107599024,LOC108444117 other upstream 2267766 5226952 ~ 5229608 (+)
ccdc120a LOC107701815,LOC107674368,LOC107584880,LOC107727423,LOC107552222 other upstream 3423477 4029303 ~ 4073897 (+)
smim15 smim15,LOC107700545 other downstream 975684 8477171 ~ 8478331 (+)
G62483 fam78bb,LOC107717547,LOC107676968,LOC107585866,LOC107751100,LOC107550401,LOC107695225 other downstream 2202994 9704481 ~ 9705639 (+)
col2a1a col2a1a,LOC107585898,LOC107668081,LOC107695274,LOC107549173,LOC107731244 other downstream 2847427 10348914 ~ 10367863 (+)
G62692 cry1ba,LOC107578471,LOC108441644,LOC107668038,LOC101164536,LOC108265656,LOC103358259 other downstream 2930315 10431802 ~ 10478799 (+)
fhad1 LOC107731229,LOC107695278,LOC107550056,LOC107667985,LOC107555592,LOC107745840,LOC107745827 other downstream 3034656 10536143 ~ 10551791 (+)

Expression


Co-expression Network