LOC122350865


Basic Information

Item Value
gene id LOC122350865
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 7505741 ~ 8019537 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247625.1
AAAGGTTATGTTGCAGAGAAGGGCAGCAAAGGGGAGCTGGGTGAGTGGGGTGATCTTGGCGAGCAGGGACCTCATGGaatcaaaggaacaaaaggagaGAAGGGAAAAAAGGGACAGAAGGGCCTAGCAGGGGTAGTAGGATATATTGGGCCACCTGGACCAAGAGGACCTCGGGGATTTATGGGGCCACCTGGTCAACCTGGACAGATAGGGGAGCCTGGGTTCACTGGATCACCAGGACCACCAGGTCTTATGGGTCCAGCGGGGTTGAAGGGAGTTCCAGGCGTCAACGGACCCCCTGGACAGCTTGGTGAGATGGGGCCAAGGGGACCACTTGGCAAACCAGGAGAGGAAGGGTCTGATGGTATTATCGGTATTCCTGGTGTTCCTGGACCCCAGGGAAAACTAGGGGGTGATGGACCACCAGGTCAGAAAGGAGACTCTGGAGATGTGGGAATCGAAGGAGACATTGGGAGTCCAGGACCACCGGGTCTAAAAGGTGCCAGTGGAAAACCAGGAAAACACGGACCCTCAGGTGATCCAGGCTTGAAAGCACAGCATGGAAAGAAAGGAGATTCTGGCCAAAAGGGAGATCTAGGTCCTCCGGGGATGCCAGGGAAACAGGGATTCAGAGGCAGAGGAGGGCAGTCTGGTGTACAGGGAGAGATTGGCCCTTCTGGACCTGCTGGTTCACCAGGGCCCACGGGATATGATGGATCTGTTGGAGATCTGGGGAGACAGGGAAATGATGGATCTAAGGGAGAGAGAGGCCACCCTGGTATCCAAGGTGCTTCTGGACTGAGAGGAGACAAGGGTCAGACTGGCCAAGGGGGATTCGTTGGTTTTCCAGGACCTTTGggGGAGATGGGAAAATCTGGAGAACCAGGGCCTGAAGGAGAGCCCGGTATTAAGGGCCGACCAGGAGTCCCTGGAGGAACCGGGTTTAAAGGTCACAAGGGACATCAGGGTGTTTCAGGGAGCAGAGGACAGGACGGCATTCACGGTGCATCTGGATCGATTGGACCATCAGGATCAGATGGAGATAAAGGACCTCAGGGTCCCCAAGGTTTACAGGGAAGGCCTGGTGCACCAGGAGTCCAAGGTCCCGTTGGAAAAAGCggGGAACCAGGGAGCCTGGGCCTCACTGGCAAACCCGGAAAGCCTGGAATCAGAGGTGTTAAAGGCAGAGAGGGTTCAGTAGGGCTTTACGGCAGTCCTGGAGAGAAGGGGAAAAGTGGTGCTGAGGGGCCCAAAGGAAATCCCGGTCAGCAAGGTCTTCGAGGCCTACCAGGAGAGAAGGGCTACAGAGGACCTGCTGGCCCACAGGGAAACATAGGGCAGTGGGGTGAAACAGGTCTGCGGGGGCCTGTAGGAAATCAAGGGCCAAGAGGGCCACCGGGGCCACATGGAGTGGCTGGGTACccaGGTAAAGATGGACCACCTGGACCCATTGGACCTCCAGCAGATAAAGGTGACAAGGGACTGAGAGGAGCCAGTGGACTGAAGGGAGCTGCTGGTATCGATGGTGAGGAGggCTCAATGGGTGAAACTGGGCCAGTCGGACCAGCAGGAAGCAAAGGCTTGTCTGGTGAGAAGGGTATCGAAGGATCTTTGGGTGATCGTGGCTCAAAAGGAATCCAAGGAGAGAGCGGAAATCGAGGACCTGCTGGATTGAAAGGACAACAAGGACAAGAAgggTTGGGTGGTTCTCTAGGGCAGAAGGGAGATCCTGGATCCCCTGGTGAAAAAggTCAGACAGGTGTGAGAGCTCACTCTGGGTTTGTAGGAACGTATGGTCCTGGAGGGAACATGGGAAAATCTGGTGAAAAAGGCGACAAAGGTCTACGTGGGCTTGTTGGTGAGGCAGGACCAAATGGGCTGCCAGGTCCAAATGGTGCTATTGGGTTACCGGGTTTGCATGGAAAAAAAGGGTTTGTCGGACAAAGTGGAAAACTTGGaccaaaaGGAGAGCCTGGAGATAAAGGGAATCCAGGCAGCCCTGGGAAGATTGGATCAATTGGTGTTTCAGGCCCAAGTGGGAAGAAAGGAGAGCTTGGAACAGGAGGCGAAATGGGGCCCGTGGGTCAGCCAGGAGCTGTGGGTCATCGTGGACTAAAGGGAAAACTAGGACCTTCAGGACCTTCAGGGGGAAAAGGATTCAAGGGTCAACCAGGGCCAAAAGGAATGAGCGGTTCTCATGGAAGGAGAGGAAGTAAAGGTGTTGCAGGAAAGCCAGGACCTCATGGACCAAAAGGGAAACATGGTAATCCTGGTCTACCTGGAAAACCAGGATGCAGTGGTACAGATGGACTGCTGGGAGTTATAGGCAATGAGGGTGACCCAGGTGACATTGGTTTCCGAGGATCTACTGGGAGACCAGGTGCTCCAGGTAGTGCTgGGGCCGCAGGAACACCAGGTTTGCAAGGGAATCAAGGACTACCTGGACCAAAGGGCTCTGTAGGACCCAAAGGATTACCAGGACCCACCAGGCTAATAGGACCAAAGGGGATTCCGGGACTTCAAGGTGAAAAGGGAGATGTTGGACAAAAAGGACCAAAGGGtcatgttggcattagaggattGCAAGGACCCGTTGGACCACCAGGAGAAAAGGGAAAGCAAGGTGCCCCAGGGTACAAGGGACGACATGGGCCTAAAGGCGTACATGGCGACGCTGGTGCTCGTGGGCGTCCTGGTGACAAAGGATTCCCTGGTTTACCTGGTCCAACTGGAAGGAAGGTGTGTACTGAAGGTGTGATCGTAATTTATACAGCTCTGCTTATCTTTGCCCTGTACATGATCCAGGGTATGAAAGGAATTCAGGGAATATCAGGACTGAAAGGTGTGAAAGGTCGGAGAGGACCTCCTGGAAAACCAGGTATTCCTGTTCAGCAGATACCAGGACATCGTACTTCACCTCATGCTCAGAGAAGAGGATCACAAAATAAAGCAAGGTCATTATCCAGAAAGTCTCGATTTGACAAGCCTGAAGATGAGTTTGAGGAAAATAGCTTCTCGCAAGGCACTAAAGACAACCCAGCAACTACCTGCAGAGAGCTGAGTCTCATCCAGCCTCACCTCAGAGATGGGCACTACTATGTTGATCCAAACCATGGATGTCCATTTGATGCTCTCCGTGTGTTCTGCAATTTCACTGCTGGTGGTCTAACTTGTGTGTCTCCCGTCCGGTCTAAAATTTCAGGGATGTGGGCATCAGAGGACAGATCTAAAAAGTGGTTTAATGAGCTGCACAGAGGCTTCAAGTTTAAGTATAGAGATCTCGATGTTGTCCAGCTGCGATTCCTACGGTTACACAGTACCTCTGCCACACAAATCATCAGCCTGACATGTCCTGAAAAACACAGCCCCACTGCTAAACACCAGGATACCACCAAGAGGGTGTTACGCTTATGGGGAGACTCCGATGAAGAAATCCATCCGTCTCATGTCCTCATATCACAACATGATTGTGAGGTAAAAGCACAGGGTGGAGGAGAAACCTGGGAAGGAGATACAAGCATCGCCCTTggacatttgtgctttttatagcgtctttccaaaaataaattctgttcacAGAGCACCTGGGATGAGTGCATTGTTTCCAGGACATACGCTACAGTTCGGCTTTGAATGCTGTATAATAATGTAACGTAGATTATAATTAGTGAATTTGTTCTACAggtttatattattcatatttctggTAGACTGAAAGTGGtgcaaaaagtgtgtgtgtgcgagtgtgtgagagacttATGTAGACTTATGTGTCAGTGGGTTGTGAGTATTTatgtactgatttatttatgtaagaTTGTAAGAATTTGTTCTGAAGGAAATGTTCATATATTGAA

Function

GO: NA

KEGG:

id description
ko05130 Pathogenic Escherichia coli infection

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247625.1 True 3857 mRNA 0.52 56 7505741 8019537

Neighbor

gene id symbol gene type direction distance location
LOC122350681 LOC107757981 coding upstream 132 7502315 ~ 7505609 (+)
LOC122350138 NA coding upstream 204681 7294115 ~ 7301060 (+)
LOC122350677 NA coding upstream 212132 7291288 ~ 7293609 (+)
LOC122350673 NA coding upstream 214493 7281725 ~ 7291248 (+)
LOC122350454 cacna1e,LOC107599003 coding upstream 224580 7171660 ~ 7281161 (+)
LOC122350682 col4a1,LOC107688716,LOC107557928,LOC107715912,LOC107721605 coding downstream 687 8020224 ~ 8028389 (+)
elavl4 elavl4,LOC107707578,LOC107699497,LOC106613894,LOC107548120,LOC107657884,LOC103028496 coding downstream 123337 8142874 ~ 8216882 (+)
cdkn2c cdkn2c,LOC107699560,LOC107743873,LOC107707576,LOC107548184,LOC107599829,LOC107657864,LOC107550257 coding downstream 327746 8347283 ~ 8351468 (+)
si:ch211-198n5.11 si:ch211-198n5.11,LOC107657892,LOC107752441,LOC107599801,LOC108265604,LOC107700393 coding downstream 437697 8457234 ~ 8463215 (+)
ercc8 ercc8,LOC107752444,LOC107599804,LOC107743893 coding downstream 460760 8480297 ~ 8488530 (+)
LOC122350887 NA non-coding upstream 4254 7497374 ~ 7501487 (+)
G61820 NA non-coding upstream 12008 7491994 ~ 7493733 (+)
LOC122350910 LOC107757980 non-coding upstream 202238 7302467 ~ 7303503 (+)
G61829 NA non-coding upstream 202758 7302439 ~ 7302983 (+)
LOC122350911 NA non-coding upstream 203273 7302130 ~ 7302468 (+)
LOC122350903 NA non-coding downstream 256038 8275575 ~ 8280335 (+)
G62002 NA non-coding downstream 264223 8283760 ~ 8283984 (+)
LOC122350828 NA non-coding downstream 332494 8352031 ~ 8354451 (+)
G62021 NA non-coding downstream 342540 8362077 ~ 8371721 (+)
G62013 NA non-coding downstream 372841 8392378 ~ 8394743 (+)
G61713 LOC107550213,LOC107755291,LOC107599058,LOC107700515,LOC107757991,LOC107665059 other upstream 656030 6848481 ~ 6849711 (+)
G61678 LOC107665067,LOC107598994,LOC107757984 other upstream 739198 6756105 ~ 6766543 (+)
LOC122350082 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108438565,LOC108264952,LOC105013926,LOC100700110,LOC105889737 other upstream 2241375 5104570 ~ 5264366 (+)
LOC122350084 atp2a2,LOC107757297,LOC107674294,LOC107566800,LOC107599024,LOC108444117 other upstream 2276133 5226952 ~ 5229608 (+)
ccdc120a LOC107701815,LOC107674368,LOC107584880,LOC107727423,LOC107552222 other upstream 3431844 4029303 ~ 4073897 (+)
smim15 smim15,LOC107700545 other downstream 457634 8477171 ~ 8478331 (+)
G62483 fam78bb,LOC107717547,LOC107676968,LOC107585866,LOC107751100,LOC107550401,LOC107695225 other downstream 1684944 9704481 ~ 9705639 (+)
col2a1a col2a1a,LOC107585898,LOC107668081,LOC107695274,LOC107549173,LOC107731244 other downstream 2329377 10348914 ~ 10367863 (+)
G62692 cry1ba,LOC107578471,LOC108441644,LOC107668038,LOC101164536,LOC108265656,LOC103358259 other downstream 2412265 10431802 ~ 10478799 (+)
fhad1 LOC107731229,LOC107695278,LOC107550056,LOC107667985,LOC107555592,LOC107745840,LOC107745827 other downstream 2516606 10536143 ~ 10551791 (+)

Expression


Co-expression Network