G61841 (LOC107700326)


Basic Information

Item Value
gene id G61841
gene name LOC107700326
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 7511083 ~ 7512428 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU91560
TTTTAAATCAAGCCTCCCTTCATTCACAAGCCATATGTTCTGCTCTTTTAATGTATAGACAAgcacattttacaaacattacatttgatATTAGGGGAAAAGTGGTGCTGAGGGGCCCAAAGGAAATCCCGGTCAGCAAGGTCTTCGAGGCCTACCAGGAGAGAAGGGCTACAGAGGACCTGCTGGCCCACAGGGAAACATAGGGCAGTGGGGTGAAACAGGTCTGCGGGGGCCTGTAGGAAATCAAGGGCCAAGAGGGCCACCGGGGCCACATGGAGTGGCTGGGTACccaGGTAAAGATGGACCACCTGGACCCATTGGACCTCCAGCAGATAAAGGTGACAAGGGACTGAGAGGAGCCAGTGGACTGAAGGGAGCTGCTGGTATCGATGggCTCAATGGGTGAAACTGGGCCAGTCGGACCAGCAGGAAGCAAAGGCTTGTCTGACAGAACTGTCGGTTGTAGGGTGAGAAGGGTATCGAAGGATCTTTGGGTGATCGTGGCTCAAAAGGAATCC

Function

NR:

description
PREDICTED: probable voltage-dependent R-type calcium channel subunit alpha-1E

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91560 True 518 lncRNA 0.53 7 7511083 7512428

Neighbor

gene id symbol gene type direction distance location
LOC122350882 NA coding upstream 422 7508814 ~ 7510661 (+)
LOC122350681 LOC107757981 coding upstream 5474 7502315 ~ 7505609 (+)
LOC122350138 NA coding upstream 210023 7294115 ~ 7301060 (+)
LOC122350677 NA coding upstream 217474 7291288 ~ 7293609 (+)
LOC122350673 NA coding upstream 219835 7281725 ~ 7291248 (+)
LOC122350878 LOC107757981,LOC107599044,LOC107757980,LOC107700337 coding downstream 284 7512712 ~ 7516604 (+)
abl2 abl2,LOC107758002,LOC107699422,LOC107657876,LOC107599009,LOC107707589,LOC107603207 coding downstream 17278 7529706 ~ 7553925 (+)
fnbp1l fnbp1l,LOC107707572,LOC107599010,LOC107757999 coding downstream 42404 7554832 ~ 7594351 (+)
paox1 LOC107707587,LOC107758000,LOC107699439,LOC107603235 coding downstream 143252 7655680 ~ 7658656 (+)
mrpl55 LOC107657860,LOC107707588,LOC107757989,LOC107699412,LOC107580195,LOC107549705 coding downstream 146602 7659030 ~ 7660199 (+)
LOC122350887 NA non-coding upstream 9596 7497374 ~ 7501487 (+)
G61820 NA non-coding upstream 17350 7491994 ~ 7493733 (+)
LOC122350910 LOC107757980 non-coding upstream 207580 7302467 ~ 7303503 (+)
G61829 NA non-coding upstream 208100 7302439 ~ 7302983 (+)
LOC122350911 NA non-coding upstream 208615 7302130 ~ 7302468 (+)
G61902 LOC107707585,LOC107757998,LOC107599011 non-coding downstream 88315 7600743 ~ 7604022 (+)
G61916 NA non-coding downstream 237280 7749708 ~ 7756124 (+)
LOC122350903 NA non-coding downstream 763147 8275575 ~ 8280335 (+)
G62002 NA non-coding downstream 771332 8283760 ~ 8283984 (+)
LOC122350828 NA non-coding downstream 839603 8352031 ~ 8354451 (+)
G61713 LOC107550213,LOC107755291,LOC107599058,LOC107700515,LOC107757991,LOC107665059 other upstream 661372 6848481 ~ 6849711 (+)
G61678 LOC107665067,LOC107598994,LOC107757984 other upstream 744540 6756105 ~ 6766543 (+)
LOC122350082 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108438565,LOC108264952,LOC105013926,LOC100700110,LOC105889737 other upstream 2246717 5104570 ~ 5264366 (+)
LOC122350084 atp2a2,LOC107757297,LOC107674294,LOC107566800,LOC107599024,LOC108444117 other upstream 2281475 5226952 ~ 5229608 (+)
ccdc120a LOC107701815,LOC107674368,LOC107584880,LOC107727423,LOC107552222 other upstream 3437186 4029303 ~ 4073897 (+)
smim15 smim15,LOC107700545 other downstream 964743 8477171 ~ 8478331 (+)
G62483 fam78bb,LOC107717547,LOC107676968,LOC107585866,LOC107751100,LOC107550401,LOC107695225 other downstream 2192053 9704481 ~ 9705639 (+)
col2a1a col2a1a,LOC107585898,LOC107668081,LOC107695274,LOC107549173,LOC107731244 other downstream 2836486 10348914 ~ 10367863 (+)
G62692 cry1ba,LOC107578471,LOC108441644,LOC107668038,LOC101164536,LOC108265656,LOC103358259 other downstream 2919374 10431802 ~ 10478799 (+)
fhad1 LOC107731229,LOC107695278,LOC107550056,LOC107667985,LOC107555592,LOC107745840,LOC107745827 other downstream 3023715 10536143 ~ 10551791 (+)

Expression


Co-expression Network