Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU188320 |
| length | 1177 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G139110 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035912.1 |
| NCBI id | CM008315.1 |
| chromosome length | 41032606 |
| location | 5344829 ~ 5346034 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU188318 | lncRNA | downstream | 2015 | 5342481 ~ 5342814 (-) | True | G139108 |
| TU188308 | lncRNA | downstream | 26013 | 5318574 ~ 5318816 (-) | True | G139098 |
| TU188265 | lncRNA | downstream | 68790 | 5209187 ~ 5276039 (-) | True | G139073 |
| TU188233 | lncRNA | downstream | 310636 | 5033042 ~ 5034193 (-) | False | G139052 |
| TU188235 | lncRNA | downstream | 311128 | 5032128 ~ 5033701 (-) | True | G139052 |
| TU188362 | lncRNA | upstream | 95752 | 5441786 ~ 5442427 (-) | True | G139149 |
| TU188363 | lncRNA | upstream | 96522 | 5442556 ~ 5442906 (-) | True | G139150 |
| TU188368 | lncRNA | upstream | 109712 | 5455746 ~ 5456022 (-) | True | G139155 |
| TU188778 | lncRNA | upstream | 190915 | 5536949 ~ 5614729 (-) | True | G139440 |
| TU188769 | lncRNA | upstream | 199210 | 5545244 ~ 5552062 (-) | True | G139435 |
| XM_022677884.1 | mRNA | downstream | 299820 | 5031419 ~ 5045009 (-) | False | LOC103027706 |
| XM_022677883.1 | mRNA | downstream | 299820 | 5031419 ~ 5045009 (-) | True | LOC103027706 |
| XM_022677874.1 | mRNA | downstream | 539162 | 4771793 ~ 4805667 (-) | True | LOC103027391 |
| XM_007250705.3 | mRNA | downstream | 577536 | 4761753 ~ 4767293 (-) | True | LOC103039917 |
| XM_007250702.3 | mRNA | downstream | 596082 | 4738988 ~ 4748747 (-) | False | LOC103039099 |
| XM_022677888.1 | mRNA | upstream | 221150 | 5567184 ~ 5598775 (-) | False | ccdc24 |
| XM_022677889.1 | mRNA | upstream | 221150 | 5567184 ~ 5596954 (-) | True | ccdc24 |
| XM_007229297.3 | mRNA | upstream | 278825 | 5624859 ~ 5898800 (-) | True | b4galt2 |
| XM_022677908.1 | mRNA | upstream | 631233 | 5977267 ~ 5997977 (-) | True | LOC103034342 |
| XM_022677909.1 | mRNA | upstream | 631233 | 5977267 ~ 5981249 (-) | False | LOC103034342 |
| TU188315 | other | downstream | 14024 | 5330078 ~ 5330805 (-) | True | G139105 |
| TU188266 | other | downstream | 68361 | 5276106 ~ 5276468 (-) | True | G139074 |
| XR_002651007.1 | other | downstream | 1006632 | 4333133 ~ 4338197 (-) | False | LOC103034146 |
| TU188021 | other | downstream | 1006735 | 4335991 ~ 4338094 (-) | False | LOC103034146 |
| TU188022 | other | downstream | 1008940 | 4331650 ~ 4335889 (-) | False | LOC103034146 |
| TU188844 | other | upstream | 663019 | 6009053 ~ 6010867 (-) | True | G139489 |
| XR_002651012.1 | other | upstream | 676575 | 6022609 ~ 6054339 (-) | False | LOC111194281 |
| XR_002651013.1 | other | upstream | 774085 | 6120119 ~ 6124125 (-) | True | LOC103026010 |
| TU188831 | other | upstream | 958935 | 6304969 ~ 6374709 (-) | True | G139487 |
| TU188973 | other | upstream | 1071351 | 6417385 ~ 6430319 (-) | True | G139587 |
