Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU105078 |
| length | 221 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 2 |
| gene id | G77919 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 3430165 ~ 3431406 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU105070 | lncRNA | downstream | 35261 | 3394349 ~ 3394904 (-) | True | G77912 |
| TU105054 | lncRNA | downstream | 70462 | 3356530 ~ 3359703 (-) | True | G77902 |
| TU105044 | lncRNA | downstream | 111600 | 3310420 ~ 3318565 (-) | True | G77894 |
| TU105046 | lncRNA | downstream | 119242 | 3310420 ~ 3310923 (-) | False | G77894 |
| TU105038 | lncRNA | downstream | 132837 | 3296348 ~ 3297328 (-) | True | G77891 |
| TU105102 | lncRNA | upstream | 83290 | 3514696 ~ 3515280 (-) | True | G77941 |
| XR_002650299.1 | lncRNA | upstream | 140617 | 3572023 ~ 3620248 (-) | True | LOC111193169 |
| XR_002650298.1 | lncRNA | upstream | 140617 | 3572023 ~ 3618454 (-) | False | LOC111193169 |
| XR_002650300.1 | lncRNA | upstream | 140617 | 3572023 ~ 3618454 (-) | False | LOC111193169 |
| TU105203 | lncRNA | upstream | 382529 | 3813935 ~ 3814733 (-) | True | G78019 |
| XM_007257936.3 | mRNA | downstream | 126598 | 3302159 ~ 3303567 (-) | True | ankrd9 |
| XM_022672601.1 | mRNA | downstream | 223479 | 3175798 ~ 3206686 (-) | True | bmf |
| XM_007257920.3 | mRNA | downstream | 223484 | 3175798 ~ 3206681 (-) | False | bmf |
| XM_022672598.1 | mRNA | downstream | 385402 | 2966898 ~ 3044763 (-) | False | LOC103029757 |
| XM_022672608.1 | mRNA | upstream | 213691 | 3645097 ~ 3714357 (-) | True | prkd1 |
| XM_022672609.1 | mRNA | upstream | 213691 | 3645097 ~ 3714016 (-) | False | prkd1 |
| XM_022672614.1 | mRNA | upstream | 449913 | 3881319 ~ 3909337 (-) | False | strn3 |
| XM_022672612.1 | mRNA | upstream | 449913 | 3881319 ~ 3909335 (-) | True | strn3 |
| XM_007257905.3 | mRNA | upstream | 486250 | 3917656 ~ 3952193 (-) | False | hectd1 |
| TU105040 | other | downstream | 81176 | 3297582 ~ 3348989 (-) | True | G77892 |
| TU104917 | other | downstream | 223949 | 3197129 ~ 3206216 (-) | False | bmf |
| TU104742 | other | downstream | 1239512 | 2190313 ~ 2190653 (-) | True | G77656 |
| TU104716 | other | downstream | 1274825 | 2151155 ~ 2155340 (-) | False | gchfr |
| XR_002650301.1 | other | upstream | 201688 | 3633094 ~ 3638915 (-) | True | LOC111193170 |
| TU105108 | other | upstream | 260201 | 3691607 ~ 3714277 (-) | False | prkd1 |
| TU105210 | other | upstream | 403156 | 3834562 ~ 3840570 (-) | True | G78023 |
| TU105293 | other | upstream | 614028 | 4045434 ~ 4206384 (-) | True | G78083 |
| TU105554 | other | upstream | 1753386 | 5184792 ~ 5186358 (-) | True | G78297 |
