Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU5708 |
| length | 316 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G4215 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035897.1 |
| NCBI id | CM008300.1 |
| chromosome length | 26953843 |
| location | 16480335 ~ 16480650 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU5689 | lncRNA | downstream | 167665 | 16312358 ~ 16312670 (-) | True | G4197 |
| TU5688 | lncRNA | downstream | 190609 | 16288143 ~ 16289726 (-) | True | G4196 |
| TU5677 | lncRNA | downstream | 203596 | 16271630 ~ 16276739 (-) | True | G4192 |
| TU5679 | lncRNA | downstream | 206516 | 16271630 ~ 16273819 (-) | False | G4192 |
| TU5617 | lncRNA | downstream | 287805 | 16191690 ~ 16192530 (-) | True | G4147 |
| TU5756 | lncRNA | upstream | 57081 | 16537731 ~ 16537940 (-) | True | G4245 |
| TU5764 | lncRNA | upstream | 80870 | 16561520 ~ 16562762 (-) | True | G4252 |
| TU5765 | lncRNA | upstream | 98832 | 16579482 ~ 16579867 (-) | True | G4253 |
| TU5766 | lncRNA | upstream | 116938 | 16597588 ~ 16597900 (-) | True | G4254 |
| TU5767 | lncRNA | upstream | 120228 | 16600878 ~ 16601102 (-) | True | G4255 |
| XM_007245976.3 | mRNA | downstream | 29333 | 16439618 ~ 16451002 (-) | True | LOC103047885 |
| XM_007245977.3 | mRNA | downstream | 67736 | 16339721 ~ 16412599 (-) | True | plekhg2 |
| XM_007245978.3 | mRNA | downstream | 92867 | 16339721 ~ 16387468 (-) | False | plekhg2 |
| XM_007245987.3 | mRNA | downstream | 169686 | 16291524 ~ 16310649 (-) | False | supt5h |
| XM_007245986.3 | mRNA | downstream | 169686 | 16291524 ~ 16310649 (-) | True | supt5h |
| XM_022668975.1 | mRNA | upstream | 62298 | 16542948 ~ 16547740 (-) | True | LOC103030646 |
| XM_007245961.3 | mRNA | upstream | 138461 | 16619111 ~ 16622984 (-) | True | LOC103044128 |
| XM_007245964.3 | mRNA | upstream | 163842 | 16644492 ~ 16653967 (-) | True | ercc2 |
| XM_015604963.2 | mRNA | upstream | 175585 | 16656235 ~ 16658680 (-) | True | LOC103043199 |
| XM_007245960.3 | mRNA | upstream | 193451 | 16674101 ~ 16686184 (-) | True | zc3h4 |
| TU5685 | other | downstream | 197705 | 16278007 ~ 16282630 (-) | False | LOC103022652 |
| trnae-uuc | other | downstream | 1445249 | 15035015 ~ 15035086 (-) | True | trnae-uuc |
| TU4805 | other | downstream | 2196110 | 14283623 ~ 14284225 (-) | True | G3612 |
| XR_002648788.1 | other | downstream | 2347799 | 14127369 ~ 14132536 (-) | False | LOC111189390 |
| XR_002649862.1 | other | upstream | 163902 | 16644552 ~ 16653968 (-) | False | ercc2 |
| TU6059 | other | upstream | 1503235 | 17983885 ~ 17998736 (-) | True | LOC103040336 |
| TU6226 | other | upstream | 1549712 | 18030362 ~ 18040766 (-) | True | G4621 |
| trnap-agg | other | upstream | 1920912 | 18401562 ~ 18401633 (-) | True | trnap-agg |
| TU6523 | other | upstream | 3158728 | 19639378 ~ 19648802 (-) | False | LOC103038769 |
