RNA id: TU311667


Basic Information

Item Value
RNA id TU311667
length 229
lncRNA type intronic
GC content 0.53
exon number 2
gene id G229267
representative True

Chromosome Information

Item Value
chromosome id NW_019170708.1
NCBI id APWO02000306.1
chromosome length 628061
location 368692 ~ 369155 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

AACAATCGGCACGCTCTGTCCCAAACAACAATCGGCACGCCCTGTCCCAACAAGAATCGGCACGCCCTGTCCCAAACGACAATCGGCACGCCCTGTCCCAACAAGAATCGGCACGCCCTGTCCCAACAAGAATCGGCACGCCCTGTCCCAACAAGAATCGGCATGCTCTGTCCCAACAAGAAACAGGATGCTGAATCCAGTGGTGATGTAACTGATATTCACTGATTTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU311605 lncRNA downstream 1932 301019 ~ 366760 (-) True G229226
TU311618 lncRNA downstream 12782 352473 ~ 355910 (-) True G229234
TU311665 lncRNA downstream 22535 313504 ~ 346157 (-) False G229265
TU311664 lncRNA downstream 22535 345373 ~ 346157 (-) True G229265
TU311597 lncRNA downstream 62174 301620 ~ 306518 (-) False G229226
TU311670 lncRNA upstream 2900 372055 ~ 372504 (-) True G229268
TU311672 lncRNA upstream 8220 377375 ~ 378974 (-) True G229270
TU311674 lncRNA upstream 9903 379058 ~ 382250 (-) True G229271
TU311675 lncRNA upstream 32025 401180 ~ 401612 (-) True G229272
TU311615 lncRNA upstream 39301 408456 ~ 507946 (-) True G229231
XM_022685590.1 mRNA downstream 218909 143901 ~ 149783 (-) True LOC111196372
XM_022685600.1 mRNA upstream 35395 404550 ~ 420783 (-) True LOC103026596
XM_015602868.2 mRNA upstream 82962 452117 ~ 470964 (-) True LOC103036421
XM_022685598.1 mRNA upstream 129114 498269 ~ 518817 (-) True LOC103036123
XM_022685588.1 mRNA upstream 159248 528403 ~ 546704 (-) False tbc1d24
XM_022685589.1 mRNA upstream 159248 528403 ~ 545045 (-) False tbc1d24
TU311617 other downstream 145379 173215 ~ 223313 (-) True G229233

Expression Profile