Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000001_05565644_05568075.mRNA |
| length | 1644 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 3 |
| gene id | CI01000001_05565644_05568075 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000001 |
| NCBI id | null |
| chromosome length | 13537560 |
| location | 5565644 ~ 5568488 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU17854 | lncRNA | upstream | 63670 | 5501780 ~ 5501974 (+) | True | G15968 |
| TU17855 | lncRNA | upstream | 63670 | 5501432 ~ 5501974 (+) | True | G15968 |
| TU17852 | lncRNA | upstream | 93267 | 5472040 ~ 5472377 (+) | True | G15966 |
| TU17850 | lncRNA | upstream | 95395 | 5470040 ~ 5470249 (+) | True | G15964 |
| TU17848 | lncRNA | upstream | 103051 | 5462386 ~ 5462593 (+) | True | G15962 |
| TU17872 | lncRNA | downstream | 3435 | 5571923 ~ 5572212 (+) | True | G15980 |
| TU17870 | lncRNA | downstream | 8922 | 5577410 ~ 5578032 (+) | True | G15978 |
| TU17877 | lncRNA | downstream | 30350 | 5598838 ~ 5599260 (+) | True | G15983 |
| TU17879 | lncRNA | downstream | 31735 | 5600223 ~ 5600503 (+) | True | G15984 |
| TU17880 | lncRNA | downstream | 32668 | 5601156 ~ 5601440 (+) | True | G15985 |
| CI01000001_05498507_05500723.mRNA | mRNA | upstream | 64528 | 5498210 ~ 5501116 (+) | False | CI01000001_05498507_05500723 |
| CI01000001_05487409_05494726.mRNA | mRNA | upstream | 70308 | 5487302 ~ 5495336 (+) | True | CI01000001_05487409_05494726 |
| CI01000001_05478200_05480124.mRNA | mRNA | upstream | 85140 | 5478200 ~ 5480504 (+) | True | CI01000001_05478200_05480124 |
| CI01000001_05427300_05427801.mRNA | mRNA | upstream | 137826 | 5427232 ~ 5427818 (+) | True | CI01000001_05427300_05427801 |
| CI01000001_05401665_05402500.mRNA | mRNA | upstream | 162873 | 5401665 ~ 5402771 (+) | True | CI01000001_05401665_05402500 |
| CI01000001_05579315_05580553.mRNA | mRNA | downstream | 10827 | 5579315 ~ 5580703 (+) | True | CI01000001_05579315_05580553 |
| CI01000001_05581818_05584137.mRNA | mRNA | downstream | 13330 | 5581818 ~ 5584621 (+) | True | CI01000001_05581818_05584137 |
| CI01000001_05587090_05591952.mRNA | mRNA | downstream | 18602 | 5587090 ~ 5592138 (+) | True | CI01000001_05587090_05591952 |
| CI01000001_05689002_05702184.mRNA | mRNA | downstream | 120167 | 5688655 ~ 5702684 (+) | False | CI01000001_05689002_05702184 |
| CI01000001_05734513_05735964.mRNA | mRNA | downstream | 164633 | 5733121 ~ 5736013 (+) | True | CI01000001_05734513_05735964 |
| TU17699 | other | upstream | 275688 | 5289881 ~ 5289956 (+) | True | G15838 |
| TU17650 | other | upstream | 500940 | 5061218 ~ 5064704 (+) | False | G15794 |
| TU17651 | other | upstream | 501715 | 5061218 ~ 5063929 (+) | True | G15794 |
| TU16602 | other | upstream | 1944193 | 3616248 ~ 3616411 (+) | True | G14846 |
| TU15116 | other | upstream | 3894640 | 1668020 ~ 1671004 (+) | True | CI01000001_01668334_01670035 |
| TU17891 | other | downstream | 143397 | 5711885 ~ 5714951 (+) | True | G15995 |
| TU19033 | other | downstream | 1964084 | 7532572 ~ 7540586 (+) | False | CI01000001_07531945_07539781 |
| TU19037 | other | downstream | 1964152 | 7532640 ~ 7540586 (+) | False | CI01000001_07531945_07539781 |
| TU19034 | other | downstream | 1964276 | 7532764 ~ 7540460 (+) | True | CI01000001_07531945_07539781 |
| TU19348 | other | downstream | 2463636 | 8032124 ~ 8032483 (+) | True | G17234 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00042884 | False | 1707 | mRNA | 0.42 | 3 | NC_007134.7 | 19106148 ~ 19119443 (+) |
