RNA id: TU36768



Basic Information


Item Value
RNA id TU36768
length 459
lncRNA type antisense_over
GC content 0.38
exon number 1
gene id G32414
representative True

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 12809617 ~ 12810075 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATCAATCAATGTATCTCCAAGTACAGCTCGGATCTCAGGAAGCTCAGAGCAGGGAACATTTTCCTGCACTAAATTCCACACAGATTGTTGGCGTTGGAAATTGTCCATGAGGCCGTTATTTCCAGAGCTGAGCACAAAAAGTTCATCACTGGAGTGCATTTGGTGTGTCCATACTGGAATGGAGGGAAACTAGCTGGAAATAAATACACAGATAAATAAATATAGCCCTACATACATTTTAAAATCTCATACAGCATTCAAAGACAGTGATACACGGGAAAGGGCATGATAAGCAAACATAACGCGTAAACAATTAATGAACTTTGGCAAAGAAAAACGTTAAACTAATATTTGGTGGCTTCAAACGTTTACGATAATGAAACAAGCATGATTGGACAAGGATTTAAGCTGGAATACATTTGTGCAAGCATTTACAGTAGTTTCAGAATAGCACATTCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU36736 lncRNA upstream 28132 12704964 ~ 12781485 (+) True G32382
TU36720 lncRNA upstream 108707 12700615 ~ 12700910 (+) True G32371
TU36699 lncRNA upstream 145805 12663579 ~ 12663812 (+) True G32350
TU36636 lncRNA upstream 307736 12501478 ~ 12501881 (+) True G32296
TU36251 lncRNA upstream 322174 12486933 ~ 12487443 (+) True G31969
TU36785 lncRNA downstream 42887 12852962 ~ 12853804 (+) True G32431
TU36795 lncRNA downstream 92462 12902537 ~ 12952107 (+) False G32439
TU36796 lncRNA downstream 98265 12908340 ~ 12952107 (+) True G32439
TU36857 lncRNA downstream 167895 12977970 ~ 12978178 (+) True G32491
TU36860 lncRNA downstream 172354 12982429 ~ 12982669 (+) True G32494
CI01000004_12764916_12775989.mRNA mRNA upstream 33445 12764916 ~ 12776172 (+) True CI01000004_12764916_12775989
CI01000004_12719753_12721562.mRNA mRNA upstream 87584 12718416 ~ 12722033 (+) True CI01000004_12719753_12721562
CI01000004_12696326_12707951.mRNA mRNA upstream 101621 12694377 ~ 12707996 (+) True CI01000004_12696326_12707951
CI01000004_12646972_12652534.mRNA mRNA upstream 157047 12646838 ~ 12652570 (+) False CI01000004_12646972_12652534
CI01000004_12625701_12630744.mRNA mRNA upstream 178691 12624321 ~ 12630926 (+) True CI01000004_12625701_12630744
CI01000004_12810922_12817913.mRNA mRNA downstream 497 12810572 ~ 12818547 (+) True CI01000004_12810922_12817913
CI01000004_12984968_12997831.mRNA mRNA downstream 174893 12984968 ~ 12998063 (+) True CI01000004_12984968_12997831
CI01000004_13043279_13051835.mRNA mRNA downstream 233162 13043237 ~ 13051964 (+) False CI01000004_13043279_13051835
CI01000004_13062721_13076100.mRNA mRNA downstream 252646 13062721 ~ 13076228 (+) True CI01000004_13062721_13076100
CI01000004_13197104_13205895.mRNA mRNA downstream 387029 13197104 ~ 13206585 (+) True CI01000004_13197104_13205895
TU36655 other upstream 153906 12642754 ~ 12655711 (+) True G32314
TU36123 other upstream 614470 12192130 ~ 12195147 (+) False G31865
TU35811 other upstream 1141958 11664773 ~ 11665473 (+) False G31611
TU35813 other upstream 1142039 11664773 ~ 11665473 (+) True G31611
TU35938 other upstream 1167217 11637251 ~ 11642400 (+) True G31710
TU37521 other downstream 1213472 14023547 ~ 14031127 (+) True G33092
TU38554 other downstream 2281169 15091244 ~ 15091969 (+) True CI01000004_15091390_15096502
TU38784 other downstream 3129282 15939357 ~ 15939950 (+) True G34220
TU38340 other downstream 3253340 16063415 ~ 16066464 (+) True G33815
TU39001 other downstream 4167253 16977328 ~ 17025469 (+) False G34400

Expression Profile