Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU60821 |
| length | 237 |
| lncRNA type | sense_over |
| GC content | 0.34 |
| exon number | 1 |
| gene id | G53405 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 5368144 ~ 5368380 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0030148 | sphingolipid biosynthetic process | biological_process |
| id | description |
|---|---|
| K10703 | HACD, PHS1, PAS2; very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU60842 | lncRNA | downstream | 114007 | 5250290 ~ 5251759 (-) | True | G53425 |
| TU60893 | lncRNA | downstream | 124416 | 5240424 ~ 5241350 (-) | True | G53476 |
| TU60832 | lncRNA | downstream | 348608 | 5013895 ~ 5017158 (-) | True | G53415 |
| TU60555 | lncRNA | downstream | 518663 | 4846901 ~ 4847103 (-) | True | G53173 |
| TU60549 | lncRNA | downstream | 526995 | 4838462 ~ 4838771 (-) | True | G53167 |
| TU60906 | lncRNA | upstream | 1200 | 5369580 ~ 5369781 (-) | True | G53487 |
| TU60909 | lncRNA | upstream | 5890 | 5374270 ~ 5374719 (-) | True | G53490 |
| TU60917 | lncRNA | upstream | 18941 | 5387321 ~ 5387664 (-) | True | G53498 |
| TU60924 | lncRNA | upstream | 25145 | 5393525 ~ 5394325 (-) | True | G53503 |
| TU60932 | lncRNA | upstream | 39618 | 5407998 ~ 5408344 (-) | True | G53510 |
| CI01000009_05362086_05363378.mRNA | mRNA | downstream | 1685 | 5362042 ~ 5364081 (-) | True | CI01000009_05362086_05363378 |
| CI01000009_05278137_05361256.mRNA | mRNA | downstream | 4288 | 5277137 ~ 5361478 (-) | True | CI01000009_05278137_05361256 |
| CI01000009_05190789_05192684.mRNA | mRNA | downstream | 172876 | 5190494 ~ 5192890 (-) | True | CI01000009_05190789_05192684 |
| CI01000009_05110455_05136845.mRNA | mRNA | downstream | 227452 | 5110205 ~ 5138314 (-) | True | CI01000009_05110455_05136845 |
| CI01000009_05046374_05094978.mRNA | mRNA | downstream | 269793 | 5046300 ~ 5095973 (-) | True | CI01000009_05046374_05094978 |
| CI01000009_05402729_05410456.mRNA | mRNA | upstream | 34124 | 5402504 ~ 5410456 (-) | True | CI01000009_05402729_05410456 |
| CI01000009_05513478_05515588.mRNA | mRNA | upstream | 144889 | 5513269 ~ 5515588 (-) | True | CI01000009_05513478_05515588 |
| CI01000009_05571226_05587885.mRNA | mRNA | upstream | 202121 | 5570501 ~ 5588015 (-) | True | CI01000009_05571226_05587885 |
| CI01000009_05675971_05682578.mRNA | mRNA | upstream | 307392 | 5675772 ~ 5683383 (-) | True | CI01000009_05675971_05682578 |
| CI01000009_05724421_05725824.mRNA | mRNA | upstream | 355461 | 5723841 ~ 5725834 (-) | True | CI01000009_05724421_05725824 |
| TU60172 | other | downstream | 1134297 | 4217420 ~ 4231469 (-) | True | G52828 |
| TU59814 | other | downstream | 2103809 | 3261203 ~ 3261957 (-) | True | CI01000009_03261739_03262843 |
| TU59711 | other | downstream | 2466359 | 2899254 ~ 2899407 (-) | True | G52415 |
| TU59706 | other | downstream | 2803233 | 2551724 ~ 2562533 (-) | True | G52410 |
| TU59631 | other | downstream | 3125002 | 2239880 ~ 2240764 (-) | False | CI01000009_02239426_02240738 |
| TU60944 | other | upstream | 134015 | 5502395 ~ 5505248 (-) | False | G53515 |
| TU63500 | other | upstream | 3057441 | 8425821 ~ 8428012 (-) | True | G55814 |
| TU64878 | other | upstream | 3489772 | 8858152 ~ 8860563 (-) | True | CI01000009_08858198_08860555 |
| TU67286 | other | upstream | 6919837 | 12288217 ~ 12289518 (-) | False | G59097 |
| TU67287 | other | upstream | 6919837 | 12288217 ~ 12288977 (-) | True | G59097 |
