RNA id: TU85094


Basic Information

Item Value
RNA id TU85094
length 306
lncRNA type inter_gene
GC content 0.30
exon number 1
gene id G74606
representative True

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 8152157 ~ 8152462 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GAGAGAGAGCCAGGTATGTGAGGTCCTGTCACGACGAAAGAGCCTCCAGCGGGACAGAACTACCAACACACTCACTATATGCCTAGAGACACTTTTATAAATATTATAAGATTGAACATTTTTATTGCAATTTTTTTTTTTTTCTATTTTATTGCTAGATTTTTTTTTTTTCTCATTTTCTTTTCTTCATCATTATTACATATATTTATTTATTTTTTGATTGTACAGTGTTATTAATGCTTTGGCAATGTAAAGATTTCTTTTACCATGCCAATAAAGCTATTTGAATCTTGAATCTTGAGAGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU85084 lncRNA downstream 1287 8134632 ~ 8150870 (-) True G74596
TU85081 lncRNA downstream 20820 8130931 ~ 8131337 (-) True G74593
TU85071 lncRNA downstream 38793 8112758 ~ 8113364 (-) True G74583
TU85064 lncRNA downstream 53155 8098193 ~ 8099002 (-) True G74576
TU85056 lncRNA downstream 60267 8091555 ~ 8091890 (-) False G74571
TU85102 lncRNA upstream 19385 8171847 ~ 8172067 (-) True G74609
TU85105 lncRNA upstream 36440 8188902 ~ 8189241 (-) True G74612
TU85120 lncRNA upstream 49927 8202389 ~ 8202603 (-) True G74624
TU85123 lncRNA upstream 52466 8204928 ~ 8205192 (-) True G74627
TU85163 lncRNA upstream 105850 8258312 ~ 8258539 (-) True G74652
CI01000012_07956050_07959414.mRNA mRNA downstream 192743 7955987 ~ 7959414 (-) True CI01000012_07956050_07959414
CI01000012_07938822_07940632.mRNA mRNA downstream 211112 7938814 ~ 7941045 (-) True CI01000012_07938822_07940632
CI01000012_07930029_07934648.mRNA mRNA downstream 217276 7929292 ~ 7934881 (-) True CI01000012_07930029_07934648
CI01000012_07925520_07928491.mRNA mRNA downstream 223666 7925456 ~ 7928491 (-) True CI01000012_07925520_07928491
CI01000012_07813654_07814853.mRNA mRNA downstream 337304 7812900 ~ 7814853 (-) True CI01000012_07813654_07814853
CI01000012_08156754_08159438.mRNA mRNA upstream 3607 8156069 ~ 8159438 (-) True CI01000012_08156754_08159438
CI01000012_08247043_08252830.mRNA mRNA upstream 93955 8246417 ~ 8252958 (-) True CI01000012_08247043_08252830
CI01000012_08376626_08388293.mRNA mRNA upstream 224156 8376618 ~ 8388293 (-) True CI01000012_08376626_08388293
CI01000012_08399430_08416750.mRNA mRNA upstream 245304 8397766 ~ 8417291 (-) True CI01000012_08399430_08416750
CI01000012_08423495_08432094.mRNA mRNA upstream 270342 8422804 ~ 8432094 (-) True CI01000012_08423495_08432094
TU84502 other downstream 793612 7355252 ~ 7355377 (-) True G74087
TU82841 other downstream 2004663 6147011 ~ 6147494 (-) True G72629
TU82465 other downstream 2686300 5462840 ~ 5465857 (-) True G72294
TU82391 other downstream 2735377 5363642 ~ 5364083 (-) False G72235
TU85146 other upstream 111867 8264329 ~ 8265654 (-) True G74648
TU85219 other upstream 214557 8367019 ~ 8367627 (-) False G74701
TU85218 other upstream 214619 8367081 ~ 8367627 (-) False G74701
TU85225 other upstream 214619 8367081 ~ 8367643 (-) True G74701
TU85328 other upstream 915444 9067906 ~ 9070667 (-) True CI01000012_09068458_09070536

Expression Profile